English
Related papers

Related papers: Comparative algorithm performance evaluation and p…

200 papers

We introduce a problem class we call Polynomial Constraint Satisfaction Problems, or PCSP. Where the usual CSPs from computer science and optimization have real-valued score functions, and partition functions from physics have monomials,…

Discrete Mathematics · Computer Science 2010-01-14 Alexander D. Scott , Gregory B. Sorkin

In this study, we address the independent set enumeration problem. Although several efficient enumeration algorithms and careful analyses have been proposed for maximal independent sets, no fine-grained analysis has been given for the…

Data Structures and Algorithms · Computer Science 2021-05-14 Kazuhiro Kurita , Kunihiro Wasa , Hiroki Arimura , Takeaki Uno

Computing the similarity between two protein structures is a crucial task in molecular biology, and has been extensively investigated. Many protein structure comparison methods can be modeled as maximum clique problems in specific k-partite…

Biomolecules · Quantitative Biology 2009-10-07 Noël Malod-Dognin , Rumen Andonov , Nicola Yanev

Finding a Maximum Clique is a classic property test from graph theory; find any one of the largest complete subgraphs in an Erd\"os-R\'enyi G(N, p) random graph. We use Maximum Clique to explore the structure of the problem as a function of…

Disordered Systems and Neural Networks · Physics 2023-05-26 Raffaele Marino , Scott Kirkpatrick

The problem of selecting an algorithm that appears most suitable for a specific instance of an algorithmic problem class, such as the Boolean satisfiability problem, is called instance-specific algorithm selection. Over the past decade, the…

Machine Learning · Computer Science 2021-07-21 Alexander Tornede , Lukas Gehring , Tanja Tornede , Marcel Wever , Eyke Hüllermeier

The success of modern parallel paradigms such as MapReduce, Hadoop, or Spark, has attracted a significant attention to the Massively Parallel Computation (MPC) model over the past few years, especially on graph problems. In this work, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-07 Soheil Behnezhad , Mahsa Derakhshan , MohammadTaghi Hajiaghayi , Richard M. Karp

We analyze the problem of identifying large cliques in graphs that are affected by adversarial uncertainty. More specifically, we consider a new formulation, namely the adversarial maximum clique problem, which extends the classical…

Optimization and Control · Mathematics 2026-01-12 Immanuel Bomze , Chiara Faccio , Francesco Rinaldi , Giovanni Spisso

The maximal clique problem, to find the maximally sized clique in a given graph, is classically an NP-complete computational problem, which has potential applications ranging from electrical engineering, computational chemistry,…

Quantum Physics · Physics 2018-04-18 Weng-Long Chang , Qi Yu , Zhaokai Li , Jiahui Chen , Xinhua Peng , Mang Feng

Given a set ${\cal R}=\{R_1,R_2,..., R_n\}$ of $n$ randomly positioned axis parallel rectangles in 2D, the problem of computing the minimum clique cover (MCC) and maximum independent set (MIS) for the intersection graph $G({\cal R})$ of the…

Computational Geometry · Computer Science 2012-12-05 Ritankar Mandal , Anirban Ghosh , Sasanka Roy , Subhas C. Nandy

Graph problems are troublesome when it comes to MapReduce. Typically, to be able to design algorithms that make use of the advantages of MapReduce, assumptions beyond what the model imposes, such as the density of the input graph, are…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-05-15 Soheil Behnezhad , Mahsa Derakhshan , MohammadTaghi Hajiaghayi

The Edge Interdiction Clique Problem (EICP) aims to remove at most $k$ edges from a graph so as to minimize the size of the largest clique in the remaining graph. This problem captures a fundamental question in graph manipulation: which…

Data Structures and Algorithms · Computer Science 2026-01-06 Yi Zhou , Haoyu Jiang , Chenghao Zhu , André Rossi

In black-box optimization, it is essential to understand why an algorithm instance works on a set of problem instances while failing on others and provide explanations of its behavior. We propose a methodology for formulating an algorithm…

Neural and Evolutionary Computing · Computer Science 2024-02-13 Ana Nikolikj , Sašo Džeroski , Mario Andrés Muñoz , Carola Doerr , Peter Korošec , Tome Eftimov

We study the maximum geometric independent set and clique problems in the streaming model. Given a collection of geometric objects arriving in an insertion only stream, the aim is to find a subset such that all objects in the subset are…

Computational Geometry · Computer Science 2022-07-05 Sujoy Bhore , Fabian Klute , Jelle J. Oostveen

Algorithm selection is crucial in the field of optimization, as no single algorithm performs perfectly across all types of optimization problems. Finding the best algorithm among a given set of algorithms for a given problem requires a…

Neural and Evolutionary Computing · Computer Science 2025-01-27 Saba Sadeghi Ahouei , Denis Antipov , Aneta Neumann , Frank Neumann

This paper studies the Graph-Connected Clique-Partitioning Problem (GCCP), a clustering optimization model in which units are characterized by both individual and relational data. This problem, introduced by Benati et al. (2017) under the…

Optimization and Control · Mathematics 2021-04-13 Stefano Benati , Diego Ponce , Justo Puerto , Antonio M. Rodríguez-Chía

This paper targets to a novel but practical recommendation problem named exact-K recommendation. It is different from traditional top-K recommendation, as it focuses more on (constrained) combinatorial optimization which will optimize to…

Information Retrieval · Computer Science 2019-05-20 Yu Gong , Yu Zhu , Lu Duan , Qingwen Liu , Ziyu Guan , Fei Sun , Wenwu Ou , Kenny Q. Zhu

We study the Maximum Balanced Biclique (MBB) problem: Given a bipartite graph $G$ with $n$ vertices on each side, find a balanced biclique in $G$ with maximum size. We give a polynomial-time $\left(\frac{n}{\widetilde{\Omega}\left((\log…

Data Structures and Algorithms · Computer Science 2026-05-01 Pasin Manurangsi

The maximal biclique enumeration problem in bipartite graphs is fundamental and has numerous applications in E-commerce and transaction networks. Most existing studies adopt a branch-and-bound framework, which recursively expands a partial…

Data Structures and Algorithms · Computer Science 2026-02-26 Kaixin Wang , Kaiqiang Yu , Cheng Long

Link streams offer a good model for representing interactions over time. They consist of links $(b,e,u,v)$, where $u$ and $v$ are vertices interacting during the whole time interval $[b,e]$. In this paper, we deal with the problem of…

Data Structures and Algorithms · Computer Science 2024-05-27 Alexis Baudin , Clémence Magnien , Lionel Tabourier

In a random intersection graph $G_{n,m,p}$, each of $n$ vertices selects a random subset of a set of $m$ labels by including each label independently with probability $p$ and edges are drawn between vertices that have at least one label in…

Discrete Mathematics · Computer Science 2022-10-06 Filippos Christodoulou , Sotiris Nikoletseas , Christoforos Raptopoulos , Paul Spirakis