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Bloom filters are probabilistic data structures commonly used for approximate membership problems in many areas of Computer Science (networking, distributed systems, databases, etc.). With the increase in data size and distribution of data,…

Databases · Computer Science 2016-09-22 Adina Crainiceanu , Daniel Lemire

Content-based image retrieval (CBIR) is a task of retrieving images from their contents. Since retrieval process is a time-consuming task in large image databases, acceleration methods can be very useful. This paper presents a novel method…

Image and Video Processing · Electrical Eng. & Systems 2019-12-24 Sadegh Fadaei , Abdolreza Rashno , Elyas Rashno

We propose to use MapReduce to quickly test new retrieval approaches on a cluster of machines by sequentially scanning all documents. We present a small case study in which we use a cluster of 15 low cost ma- chines to search a web crawl of…

Information Retrieval · Computer Science 2012-05-02 Djoerd Hiemstra , Claudia Hauff

Code clone detection is involved with detecting duplicated fragments of code within a code base. Detecting these clones is useful for maintenance operations which require editing the clones. The tools developed are expected to be robust…

Software Engineering · Computer Science 2016-05-10 Ogechi Onuoha

This paper studies the utility of using data analytics and machine learning techniques for identifying, classifying, and characterizing the dynamics of large-scale parallel (MPI) programs. To this end, we run microbenchmarks and realistic…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-06 Ayesha Afzal , Georg Hager , Gerhard Wellein , Stefano Markidis

One important tool is the optimal clustering of data into useful categories. Dividing similar objects into a smaller number of clusters is of importance in many applications. These include search engines, monitoring of academic performance,…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-21 Gavriel Yarmish , Philip Listowsky , Simon Dexter

Density-based clustering aims to find groups of similar objects (i.e., clusters) in a given dataset. Applications include, e.g., process mining and anomaly detection. It comes with two user parameters ({\epsilon}, MinPts) that determine the…

Motivation: FASTQ is a standard file format for DNA sequencing data which stores both nucleotides and quality scores. A typical sequencing study can easily generate hundreds of gigabytes of FASTQ files, while public archives such as ENA and…

Genomics · Quantitative Biology 2014-06-18 Lilian Janin , Ole Schulz-Trieglaff , Anthony J. Cox

This work describes a system that performs morphological analysis and generation of Pali words. The system works with regular inflectional paradigms and a lexical database. The generator is used to build a collection of inflected and…

Computation and Language · Computer Science 2015-10-07 David Alfter

NORI performs probabilistic inference to resolve ambiguous mappings between experimental observations and biological entities orders of magnitude faster than state-of-the-art methods. This makes large-scale analysis and extensive…

Quantitative Methods · Quantitative Biology 2026-05-13 Simon Van de Vyver , Tibo Vande Moortele , Ben-Björn Binke , Pieter Verschaffelt , Peter Dawyndt , Bart Mesuere

Code clones are similar code fragments that often arise from copy-and-paste programming. Neural networks can classify pairs of code fragments as clone/not-clone with high accuracy. However, finding clones in industrial-scale code needs a…

Software Engineering · Computer Science 2025-04-28 Gul Aftab Ahmed , Muslim Chochlov , Abdul Razzaq , James Vincent Patten , Yuanhua Han , Guoxian Lu , Jim Buckley , David Gregg

Exploiting the performance of today's microprocessors requires intimate knowledge of the microarchitecture as well as an awareness of the ever-growing complexity in thread and cache topology. LIKWID is a set of command line utilities that…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-01-08 Jan Treibig , Georg Hager , Gerhard Wellein

The problem of landmark recognition has achieved excellent results in small-scale datasets. When dealing with large-scale retrieval, issues that were irrelevant with small amount of data, quickly become fundamental for an efficient…

Computer Vision and Pattern Recognition · Computer Science 2018-06-18 Federico Magliani , Tomaso Fontanini , Andrea Prati

Programmers often reuse code from source code repositories to reduce the development effort. Code clones are candidates for reuse in exploratory or rapid development, as they represent often repeated functionality in software systems. To…

Software Engineering · Computer Science 2020-12-08 Muhammad Hammad , Önder Babur , Hamid Abdul Basit , Mark van den Brand

Graph pattern matching is a fundamental problem encountered by many common graph mining tasks and the basic building block of several graph mining systems. This paper explores for the first time how to proactively prune graphs to speed up…

Databases · Computer Science 2024-03-05 Juelin Liu , Sandeep Polisetty , Hui Guan , Marco Serafini

Test-time scaling improves large language models (LLMs) on long-horizon reasoning tasks by allocating more compute at inference. LLM inference via tree search (LITS) achieves strong performance but is highly inefficient. We propose…

Artificial Intelligence · Computer Science 2026-04-13 Xinzhe Li

Deep neural networks (DNNs) offer a means of addressing the challenging task of clustering high-dimensional data. DNNs can extract useful features, and so produce a lower dimensional representation, which is more amenable to clustering…

Machine Learning · Computer Science 2021-07-23 Louis Mahon , Thomas Lukasiewicz

Information extraction tasks require both accurate, efficient, and generalisable models. Classical supervised deep learning approaches can achieve the required performance, but they need large datasets and are limited in their ability to…

Machine Learning · Computer Science 2024-08-02 Ihor Stepanov , Mykhailo Shtopko

Investigating the code fragments of code clones detected by code clone detection tools is a time-consuming task, especially when a large number of reference source files are available. This paper proposes (i) a method for clustering a clone…

Software Engineering · Computer Science 2021-10-05 Daisuke Nishioka , Toshihiro Kamiya

Entity resolution (ER; also known as record linkage or de-duplication) is the process of merging noisy databases, often in the absence of unique identifiers. A major advancement in ER methodology has been the application of Bayesian…