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In neuroscience research, achieving single-neuron matching across different imaging modalities is critical for understanding the relationship between neuronal structure and function. However, modality gaps and limited annotations present…

Computer Vision and Pattern Recognition · Computer Science 2025-04-24 Wenwei Li , Liyi Cai , Wu Chen , Anan Li

As 3D perception problems grow in popularity and the need for large-scale labeled datasets for LiDAR semantic segmentation increase, new methods arise that aim to reduce the necessity for dense annotations by employing weakly-supervised…

Computer Vision and Pattern Recognition · Computer Science 2023-11-28 Ozan Unal , Dengxin Dai , Lukas Hoyer , Yigit Baran Can , Luc Van Gool

Semantic segmentation requires dense pixel-level annotations, which are costly and time-consuming to acquire. To address this, we present SeSAM, a framework that uses a foundational segmentation model, i.e. Segment Anything Model (SAM),…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Anurag Das , Anna Kukleva , Xinting Hu , Yuki M. Asano , Bernt Schiele

The Segment Anything Model (SAM) exhibits a capability to segment a wide array of objects in natural images, serving as a versatile perceptual tool for various downstream image segmentation tasks. In contrast, medical image segmentation…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Yizhe Zhang , Tao Zhou , Shuo Wang , Ye Wu , Pengfei Gu , Danny Z. Chen

The advent of foundation models signals a new era in artificial intelligence. The Segment Anything Model (SAM) is the first foundation model for image segmentation. In this study, we evaluate SAM's ability to segment features from eye…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Virmarie Maquiling , Sean Anthony Byrne , Diederick C. Niehorster , Marcus Nyström , Enkelejda Kasneci

Reconstructing a map of neuronal connectivity is a critical challenge in contemporary neuroscience. Recent advances in high-throughput serial section electron microscopy (EM) have produced massive 3D image volumes of nanoscale brain tissue…

Advances in machine learning, especially the introduction of transformer architectures and vision transformers, have led to the development of highly capable computer vision foundation models. The segment anything model (known colloquially…

Computer Vision and Pattern Recognition · Computer Science 2025-05-29 Kenneth Ball , Erin Taylor , Nirav Patel , Andrew Bartels , Gary Koplik , James Polly , Jay Hineman

Accurate segmentation of electron microscopy (EM) volumes of the brain is essential to characterize neuronal structures at a cell or organelle level. While supervised deep learning methods have led to major breakthroughs in that direction…

Computer Vision and Pattern Recognition · Computer Science 2022-07-06 Daniel Franco-Barranco , Julio Pastor-Tronch , Aitor Gonzalez-Marfil , Arrate Muñoz-Barrutia , Ignacio Arganda-Carreras

Semantic segmentation is a crucial task in medical imaging. Although supervised learning techniques have proven to be effective in performing this task, they heavily depend on large amounts of annotated training data. The recently…

Computer Vision and Pattern Recognition · Computer Science 2024-11-20 Ron Keuth , Lasse Hansen , Maren Balks , Ronja Jäger , Anne-Nele Schröder , Ludger Tüshaus , Mattias Heinrich

This paper presents the Autonomous Driving Segment Anything Model (AD-SAM), a fine-tuned vision foundation model for semantic segmentation in autonomous driving (AD). AD-SAM extends the Segment Anything Model (SAM) with a dual-encoder and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-03 Mario Camarena , Het Patel , Fatemeh Nazari , Evangelos Papalexakis , Mohamadhossein Noruzoliaee , Jia Chen

Automated segmentation of retinal blood vessels in label-free fundus images entails a pivotal role in computed aided diagnosis of ophthalmic pathologies, viz., diabetic retinopathy, hypertensive disorders and cardiovascular diseases. The…

Computer Vision and Pattern Recognition · Computer Science 2016-11-17 Avisek Lahiri , Abhijit Guha Roy , Debdoot Sheet , Prabir Kumar Biswas

Domain-generalized retinal vessel segmentation is critical for automated ophthalmic diagnosis, yet faces significant challenges from domain shift induced by non-uniform illumination and varying contrast, compounded by the difficulty of…

Computer Vision and Pattern Recognition · Computer Science 2026-01-12 Chanchan Wang , Yuanfang Wang , Qing Xu , Guanxin Chen

3D teeth segmentation, involving the localization of tooth instances and their semantic categorization in 3D dental models, is a critical yet challenging task in digital dentistry due to the complexity of real-world dentition. In this…

Computer Vision and Pattern Recognition · Computer Science 2025-12-15 Zhiguo Lu , Jianwen Lou , Mingjun Ma , Hairong Jin , Youyi Zheng , Kun Zhou

In the field of healthcare, precise skin lesion segmentation is crucial for the early detection and accurate diagnosis of skin diseases. Despite significant advances in deep learning for image processing, existing methods have yet to…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Siyu Wang , Hua Wang , Huiyu Li , Fan Zhang

Recent advances in medical image segmentation have been driven by deep learning; however, most existing methods remain limited by modality-specific designs and exhibit poor adaptability to dynamic medical imaging scenarios. The Segment…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Guoping Xu , Christopher Kabat , You Zhang

Semantic segmentation is an essential part of deep learning. In recent years, with the development of remote sensing big data, semantic segmentation has been increasingly used in remote sensing. Deep convolutional neural networks (DCNNs)…

Computer Vision and Pattern Recognition · Computer Science 2021-05-31 Xuan Yang , Shanshan Li , Zhengchao Chen , Jocelyn Chanussot , Xiuping Jia , Bing Zhang , Baipeng Li , Pan Chen

As a specific semantic segmentation task, aerial imagery segmentation has been widely employed in high spatial resolution (HSR) remote sensing images understanding. Besides common issues (e.g. large scale variation) faced by general…

Computer Vision and Pattern Recognition · Computer Science 2022-02-22 Lin Huang , Qiyuan Dong , Lijun Wu , Jia Zhang , Jiang Bian , Tie-Yan Liu

Due to the low signal-to-noise ratio and limited resolution of functional MRI data, and the high complexity of natural images, reconstructing a visual stimulus from human brain fMRI measurements is a challenging task. In this work, we…

Computer Vision and Pattern Recognition · Computer Science 2023-03-07 Zijin Gu , Keith Jamison , Amy Kuceyeski , Mert Sabuncu

Even though convolutional neural networks (CNNs) are driving progress in medical image segmentation, standard models still have some drawbacks. First, the use of multi-scale approaches, i.e., encoder-decoder architectures, leads to a…

Computer Vision and Pattern Recognition · Computer Science 2020-02-18 Ashish Sinha , Jose Dolz

The throughput of electron microscopes has increased significantly in recent years, enabling detailed analysis of cell morphology and ultrastructure. Analysis of neural circuits at single-synapse resolution remains the flagship target of…

Computer Vision and Pattern Recognition · Computer Science 2019-08-07 Constantin Pape , Alex Matskevych , Adrian Wolny , Julian Hennies , Giula Mizzon , Marion Louveaux , Jacob Musser , Alexis Maizel , Detlev Arendt , Anna Kreshuk
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