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Stochastic models of diffusion with excluded-volume effects are used to model many biological and physical systems at a discrete level. The average properties of the population may be described by a continuum model based on partial…

Chemical Physics · Physics 2012-12-20 Maria Bruna , S. Jonathan Chapman

Phenotypic plasticity and its evolution may help evolutionary rescue in a novel and stressful environment, especially if environmental novelty reveals cryptic genetic variation that enables the evolution of increased plasticity. However,…

Populations and Evolution · Quantitative Biology 2016-09-23 Jaime Ashander , Luis-Miguel Chevin , Marissa L. Baskett

Recently we have introduced a simplified model of ecosystem assembly (Capitan et al., 2009) for which we are able to map out all assembly pathways generated by external invasions in an exact manner. In this paper we provide a deeper…

Populations and Evolution · Quantitative Biology 2015-02-18 Jose A. Capitan , Jose A. Cuesta

A deterministic two-species predator-prey model with prey herd behavior is considered incorporating mutual interference and the effect of fear. We provide guidelines to the dynamical analysis of biologically feasible equilibrium points. We…

Dynamical Systems · Mathematics 2022-12-20 Kwadwo Antwi-Fordjour , Rana D. Parshad , Hannah E. Thompson , Stephanie B. Westaway

This paper investigates the dynamics of a reaction-diffusion system with two free boundaries, modeling the invasion of two cooperative species, where the free boundaries represent expanding fronts. We first analyze the long-term behavior of…

Analysis of PDEs · Mathematics 2025-11-21 Qian Qin , JinJing Jiao , Zhiguo Wang , Hua Nie

We consider a system of two stochastic differential equations (SDEs) with competing two-way interactions driven by Brownian motions and spectrally positive $\alpha$-stable random measures. Such a SDE system can be identified as a…

Probability · Mathematics 2026-03-09 Jie Xiong , Xu Yang , Xiaowen Zhou

In the setting of stochastic dynamical systems that eventually go extinct, the quasi-stationary distributions are useful to understand the long-term behavior of a system before evanescence. For a broad class of applicable continuous-time…

Probability · Mathematics 2018-08-22 Mads Christian Hansen , Carsten Wiuf

We propose a model of multispecies populations surviving on distributed resources. System dynamics are investigated under changes in abiotic factors such as the climate, as parameterized through environmental temperature. In particular, we…

Populations and Evolution · Quantitative Biology 2017-10-25 I. Sudakov , S. A. Vakulenko , D. Kirievskaya , K. M. Golden

Ecological communities with many species can be classified into dynamical phases. In systems with all-to-all interactions, a phase where a fixed point is always reached and a dynamically-fluctuating phase have been found. The dynamics when…

Populations and Evolution · Quantitative Biology 2023-08-04 Stav Marcus , Ari M Turner , Guy Bunin

A stochastic reaction-diffusion model is studied on a networked support. In each patch of the network two species are assumed to interact following a non-normal reaction scheme. When the interaction unit is replicated on a directed linear…

The environment in which a population evolves can have a crucial impact on selection. We study evolutionary dynamics in finite populations of fixed size in a changing environment. The population dynamics are driven by birth and death…

Populations and Evolution · Quantitative Biology 2014-09-01 Peter Ashcroft , Philipp M Altrock , Tobias Galla

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-18 Chengyi Tu , Samir Suweis , Jacopo Grillib , Marco Formentin , Amos Maritan

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-21 Chengyi Tu , Samir Suweis , Jacopo Grilli , Marco Formentin , Amos Maritan

We study a generic reaction-diffusion model for single-species population dynamics that includes reproduction, death, and competition. The population is assumed to be confined in a refuge beyond which conditions are so harsh that they lead…

Statistical Mechanics · Physics 2009-11-10 C. Escudero , J. Buceta , F. J. de la Rubia , Katja Lindenberg

An ecological system with multiple stable equilibria is prone to undergo catastrophic change or regime shift from one steady-state to another. It should be noted that, if one of the steady states is an extinction state, the catastrophic…

Populations and Evolution · Quantitative Biology 2021-08-18 Anurag Sau , Sabyasachi Bhattacharya , Bapi Saha

The diffusive epidemic process is a paradigmatic example of an absorbing state phase transition in which healthy and infected individuals spread with different diffusion constants. Using stochastic activity spreading simulations in…

Statistical Mechanics · Physics 2022-03-02 Borislav Polovnikov , Patrick Wilke , Erwin Frey

The persistence of populations depends on the minimum habitat area required for survival, known as the critical patch size. While most studies assume purely diffusive movement, additional movement components can significantly alter habitat…

Statistical Mechanics · Physics 2025-07-11 Luiz Menon , Pablo de Castro , Celia Anteneodo

In a complex community, species continuously adapt to each other. On rare occasions, the adaptation of a species can lead to the extinction of others, and even its own. "Adaptive dynamics" is the standard mathematical framework to describe…

Populations and Evolution · Quantitative Biology 2021-07-13 Vu AT Nguyen , Dervis C Vural

When four species compete stochastically in a cyclic way, the formation of two teams of mutually neutral partners is observed. In this paper we study through numerical simulations the extinction processes that can take place in this system…

Populations and Evolution · Quantitative Biology 2013-11-14 Ben Intoy , Michel Pleimling

Bacterial populations in natural conditions are expected to experience stochastic environmental fluctuations, and in addition, environments are affected by bacterial activities since they consume substrates and excrete various chemicals. We…

Populations and Evolution · Quantitative Biology 2020-04-01 Yusuke Himeoka , Namiko Mitarai