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Clinical notes are unstructured text generated by clinicians during patient encounters. Clinical notes are usually accompanied by a set of metadata codes from the International Classification of Diseases(ICD). ICD code is an important code…

Artificial Intelligence · Computer Science 2021-11-12 Tak-Sung Heo , Yongmin Yoo , Yeongjoon Park , Byeong-Cheol Jo , Kyungsun Kim

International Classification of Diseases (ICD) is a set of classification codes for medical records. Automated ICD coding, which assigns unique International Classification of Diseases codes with each medical record, is widely used recently…

Artificial Intelligence · Computer Science 2022-12-12 Shi Wang , Daniel Tang , Luchen Zhang , Huilin Li , Ding Han

Deep learning has introduced significant improvements in many software analysis tasks. Although the Large Language Models (LLMs) based neural code models demonstrate commendable performance when trained and tested within the intra-project…

Artificial Intelligence · Computer Science 2024-03-12 Zhiming Li , Yanzhou Li , Tianlin Li , Mengnan Du , Bozhi Wu , Yushi Cao , Junzhe Jiang , Yang Liu

ICD(International Classification of Diseases) coding involves assigning ICD codes to patients visit based on their medical notes. ICD coding is a challenging multilabel text classification problem due to noisy medical document inputs.…

Computation and Language · Computer Science 2024-09-04 Bin Zhang , Junli Wang

Clinical information systems have become large repositories for semi-structured and partly annotated electronic health record data, which have reached a critical mass that makes them interesting for supervised data-driven neural network…

Computation and Language · Computer Science 2023-05-22 Markus Kreuzthaler , Bastian Pfeifer , Diether Kramer , Stefan Schulz

Real-world data usually present long-tailed distributions. Training on imbalanced data tends to render neural networks perform well on head classes while much worse on tail classes. The severe sparseness of training instances for the tail…

Machine Learning · Computer Science 2021-11-10 Chaozheng Wang , Shuzheng Gao , Cuiyun Gao , Pengyun Wang , Wenjie Pei , Lujia Pan , Zenglin Xu

Clinical coding is an administrative process that involves the translation of diagnostic data from episodes of care into a standard code format such as ICD10. It has many critical applications such as billing and aetiology research. The…

International Classification of Diseases (ICD) coding assigns diagnosis codes to clinical documents and is essential for healthcare billing and clinical analysis. Reliable coding requires that each predicted code be supported by explicit…

Computation and Language · Computer Science 2026-05-08 Xu Zhang , Wenxin Ma , Chenxu Wu , Rongsheng Wang , Zhiyang He , Xiaodong Tao , Kun Zhang , S. Kevin Zhou

The use of International Classification of Diseases (ICD) codes in healthcare presents a challenge in selecting relevant codes as features for machine learning models due to this system's large number of codes. In this study, we compared…

Machine Learning · Computer Science 2024-10-29 Peyman Ghasemi , Joon Lee

Long-tailed datasets are very frequently encountered in real-world use cases where few classes or categories (known as majority or head classes) have higher number of data samples compared to the other classes (known as minority or tail…

Computer Vision and Pattern Recognition · Computer Science 2022-08-23 Saptarshi Sinha , Hiroki Ohashi , Katsuyuki Nakamura

ICD coding from electronic clinical records is a manual, time-consuming and expensive process. Code assignment is, however, an important task for billing purposes and database organization. While many works have studied the problem of…

Computation and Language · Computer Science 2020-11-18 Arthur D. Reys , Danilo Silva , Daniel Severo , Saulo Pedro , Marcia M. de Souza e Sá , Guilherme A. C. Salgado

The International Classification of Diseases (ICD) system is the international standard for classifying diseases and procedures during a healthcare encounter and is widely used for healthcare reporting and management purposes. Assigning…

Computation and Language · Computer Science 2022-04-25 George Michalopoulos , Michal Malyska , Nicola Sahar , Alexander Wong , Helen Chen

Long-tailed data is prevalent in real-world classification tasks and heavily relies on supervised information, which makes the annotation process exceptionally labor-intensive and time-consuming. Unfortunately, despite being a common…

Machine Learning · Computer Science 2024-12-04 Meng Wei , Zhongnian Li , Yong Zhou , Xinzheng Xu

Addressing the complexity of accurately classifying International Classification of Diseases (ICD) codes from medical discharge summaries is challenging due to the intricate nature of medical documentation. This paper explores the use of…

Machine Learning · Computer Science 2024-11-12 Zeyd Boukhers , AmeerAli Khan , Qusai Ramadan , Cong Yang

Natural data are often long-tail distributed over semantic classes. Existing recognition methods tackle this imbalanced classification by placing more emphasis on the tail data, through class re-balancing/re-weighting or ensembling over…

Computer Vision and Pattern Recognition · Computer Science 2022-05-03 Xudong Wang , Long Lian , Zhongqi Miao , Ziwei Liu , Stella X. Yu

Medical code assignment, which predicts medical codes from clinical texts, is a fundamental task of intelligent medical information systems. The emergence of deep models in natural language processing has boosted the development of…

Computation and Language · Computer Science 2021-09-27 Shaoxiong Ji , Erik Cambria , Pekka Marttinen

ICD-9 coding is a relevant clinical billing task, where unstructured texts with information about a patient's diagnosis and treatments are annotated with multiple ICD-9 codes. Automated ICD-9 coding is an active research field, where CNN-…

Machine Learning · Computer Science 2021-09-27 Malte Feucht , Zhiliang Wu , Sophia Althammer , Volker Tresp

ICD coding is designed to assign the disease codes to electronic health records (EHRs) upon discharge, which is crucial for billing and clinical statistics. In an attempt to improve the effectiveness and efficiency of manual coding, many…

Computation and Language · Computer Science 2023-05-31 Zichen Liu , Xuyuan Liu , Yanlong Wen , Guoqing Zhao , Fen Xia , Xiaojie Yuan

Medical coding is the task of assigning medical codes to clinical free-text documentation. Healthcare professionals manually assign such codes to track patient diagnoses and treatments. Automated medical coding can considerably alleviate…

Machine Learning · Computer Science 2023-04-24 Joakim Edin , Alexander Junge , Jakob D. Havtorn , Lasse Borgholt , Maria Maistro , Tuukka Ruotsalo , Lars Maaløe

Current out-of-distribution (OOD) detection methods typically assume balanced in-distribution (ID) data, while most real-world data follow a long-tailed distribution. Previous approaches to long-tailed OOD detection often involve balancing…

Computer Vision and Pattern Recognition · Computer Science 2024-12-19 Yina He , Lei Peng , Yongcun Zhang , Juanjuan Weng , Zhiming Luo , Shaozi Li