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Easy Parameter Inference in Cosmology (EPIC) is another Markov Chain Monte Carlo (MCMC) sampler for Cosmology. It is implemented in Python and provides Bayesian parameter inference and model comparison based on the Bayesian evidence. The…

Instrumentation and Methods for Astrophysics · Physics 2018-09-19 Rafael J. F. Marcondes

We present a comprehensive analysis of statistical tools for evaluating tensions in cosmological parameter estimates arising from distinct datasets. Focusing on the unresolved Hubble constant ($H_0$) tension, we explore the Pantheon Plus +…

Cosmology and Nongalactic Astrophysics · Physics 2024-07-17 Matías Leizerovich , Susana J. Landau , Claudia G. Scóccola

pocoMC is a Python package for accelerated Bayesian inference in astronomy and cosmology. The code is designed to sample efficiently from posterior distributions with non-trivial geometry, including strong multimodality and non-linearity.…

Instrumentation and Methods for Astrophysics · Physics 2022-07-13 Minas Karamanis , David Nabergoj , Florian Beutler , John A. Peacock , Uros Seljak

The posterior probability distribution for a set of model parameters encodes all that the data have to tell us in the context of a given model; it is the fundamental quantity for Bayesian parameter estimation. In order to infer the…

Instrumentation and Methods for Astrophysics · Physics 2015-06-16 Rupert Allison , Joanna Dunkley

Discrete state spaces represent a major computational challenge to statistical inference, since the computation of normalisation constants requires summation over large or possibly infinite sets, which can be impractical. This paper…

Methodology · Statistics 2023-09-04 Takuo Matsubara , Jeremias Knoblauch , François-Xavier Briol , Chris. J. Oates

Recent progress in cosmology has relied on combining different cosmological probes. In earlier work, we implemented an integrated approach to cosmology where the probes are combined into a common framework at the map level. This has the…

Cosmology and Nongalactic Astrophysics · Physics 2017-05-03 Andrina Nicola , Alexandre Refregier , Adam Amara

Prior information often takes the form of parameter constraints. Bayesian methods include such information through prior distributions having constrained support. By using posterior sampling algorithms, one can quantify uncertainty without…

Methodology · Statistics 2018-09-25 Leo L Duan , Alexander L Young , Akihiko Nishimura , David B Dunson

In performing a Bayesian analysis, two difficult problems often emerge. First, in estimating the parameters of some model for the data, the resulting posterior distribution may be multi-modal or exhibit pronounced (curving) degeneracies.…

Instrumentation and Methods for Astrophysics · Physics 2013-12-20 F. Feroz , J. Skilling

In recent years, methods for Bayesian inference have been widely used in many different problems in physics where detection and characterization are necessary. Data analysis in gravitational-wave astronomy is a prime example of such a case.…

Instrumentation and Methods for Astrophysics · Physics 2023-10-11 Nikolaos Karnesis , Michael L. Katz , Natalia Korsakova , Jonathan R. Gair , Nikolaos Stergioulas

Bayesian inference provides a methodology for parameter estimation and uncertainty quantification in machine learning and deep learning methods. Variational inference and Markov Chain Monte-Carlo (MCMC) sampling methods are used to…

Machine Learning · Statistics 2024-08-27 Rohitash Chandra , Joshua Simmons

Bayesian inference requires determining the posterior distribution, a task that becomes particularly challenging when the dimension of the parameter space is large and unknown. This limitation arises in many physics problems, such as…

Can new cosmic physics be uncovered through tensions amongst datasets? Tensions in parameter determinations amongst different types of cosmological observation, especially the `Hubble tension' between probes of the expansion rate, have been…

Cosmology and Nongalactic Astrophysics · Physics 2024-04-24 Marina Cortês , Andrew R. Liddle

The abundance of new cosmological data becoming available means that a wider range of cosmological models are testable than ever before. However, an important distinction must be made between parameter fitting and model selection. While…

Astrophysics · Physics 2009-11-13 Pia Mukherjee , David Parkinson , Andrew R. Liddle

Approximate Bayesian Computation (ABC) enables parameter inference for complex physical systems in cases where the true likelihood function is unknown, unavailable, or computationally too expensive. It relies on the forward simulation of…

Cosmology and Nongalactic Astrophysics · Physics 2019-08-13 E. E. O. Ishida , S. D. P. Vitenti , M. Penna-Lima , J. Cisewski , R. S. de Souza , A. M. M. Trindade , E. Cameron , V. C. Busti

Nested sampling is a promising tool for Bayesian statistical analysis because it simultaneously performs parameter estimation and facilitates model comparison. MultiNest is one of the most popular nested sampling implementations, and has…

Instrumentation and Methods for Astrophysics · Physics 2024-09-24 Alexander J. Dittmann

We introduce zeus, a well-tested Python implementation of the Ensemble Slice Sampling (ESS) method for Bayesian parameter inference. ESS is a novel Markov chain Monte Carlo (MCMC) algorithm specifically designed to tackle the computational…

Instrumentation and Methods for Astrophysics · Physics 2021-10-05 Minas Karamanis , Florian Beutler , John A. Peacock

We propose a principled Bayesian method for quantifying tension between correlated datasets with wide uninformative parameter priors. This is achieved by extending the Suspiciousness statistic, which is insensitive to priors. Our method…

Cosmology and Nongalactic Astrophysics · Physics 2020-07-08 Pablo Lemos , Fabian Köhlinger , Will Handley , Benjamin Joachimi , Lorne Whiteway , Ofer Lahav

We introduce a novel technique within the Nested Sampling framework to enhance efficiency of the computation of Bayesian evidence, a critical component in scientific data analysis. In higher dimensions, Nested Sampling relies on Markov…

Instrumentation and Methods for Astrophysics · Physics 2023-12-19 Joshua G. Albert

Bayesian model selection provides a powerful framework for objectively comparing models directly from observed data, without reference to ground truth data. However, Bayesian model selection requires the computation of the marginal…

Methodology · Statistics 2024-01-17 Xiaohao Cai , Jason D. McEwen , Marcelo Pereyra

Markov Chain Monte Carlo (MCMC) excels at sampling complex posteriors but traditionally lags behind nested sampling in accurate evidence estimation, which is crucial for model comparison in astrophysical problems. We introduce reddemcee, an…

Instrumentation and Methods for Astrophysics · Physics 2026-02-25 Pablo A. Peña , James S. Jenkins