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Despite of the pervasive existence of multi-label evasion attack, it is an open yet essential problem to characterize the origin of the adversarial vulnerability of a multi-label learning system and assess its attackability. In this study,…

Machine Learning · Computer Science 2021-06-30 Zhuo Yang , Yufei Han , Xiangliang Zhang

We present new methods for multilabel classification, relying on ensemble learning on a collection of random output graphs imposed on the multilabel and a kernel-based structured output learner as the base classifier. For ensemble learning,…

Machine Learning · Computer Science 2013-11-19 Hongyu Su , Juho Rousu

In this work, we study semi-supervised multi-label node classification problem in attributed graphs. Classic solutions to multi-label node classification follow two steps, first learn node embedding and then build a node classifier on the…

Machine Learning · Computer Science 2024-03-14 Uchenna Akujuobi , Han Yufei , Qiannan Zhang , Xiangliang Zhang

Proteins perform nearly all cellular functions and constitute most drug targets, making their analysis fundamental to understanding human biology in health and disease. Tandem mass spectrometry (MS$^2$) is the major analytical technique in…

Biomolecules · Quantitative Biology 2025-09-01 Hao Xu , Zhichao Wang , Shengqi Sang , Pisit Wajanasara , Nuno Bandeira

Active learning aims to develop label-efficient algorithms by querying the most representative samples to be labeled by a human annotator. Current active learning techniques either rely on model uncertainty to select the most uncertain…

Computer Vision and Pattern Recognition · Computer Science 2021-03-31 Sayna Ebrahimi , William Gan , Dian Chen , Giscard Biamby , Kamyar Salahi , Michael Laielli , Shizhan Zhu , Trevor Darrell

Generating crisp, i.e., one-pixel-wide, edge maps remains one of the fundamental challenges in edge detection, affecting both traditional and learning-based methods. To obtain crisp edges, most existing approaches rely on two hand-crafted…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Bedrettin Cetinkaya , Sinan Kalkan , Emre Akbas

Over-dispersed count data typically pose a challenge to analysis using standard statistical methods, particularly when evaluating the efficacy of an intervention through the observed effect on the mean. We outline a novel statistical method…

The discovery of peptides having high biological activity is very challenging mainly because there is an enormous diversity of compounds and only a minority have the desired properties. To lower cost and reduce the time to obtain promising…

Quantitative Methods · Quantitative Biology 2014-04-11 Sébastien Giguère , François Laviolette , Mario Marchand , Denise Tremblay , Sylvain Moineau , Éric Biron , Jacques Corbeil

Machine learning models are commonly used for malware classification; however, they suffer from performance degradation over time due to concept drift. Adapting these models to changing data distributions requires frequent updates, which…

Machine Learning · Computer Science 2025-08-05 Md Tanvirul Alam , Aritran Piplai , Nidhi Rastogi

Pro-inflammatory peptides (PIPs) play critical roles in immune signaling and inflammation but are difficult to identify experimentally due to costly and time-consuming assays. To address this challenge, we present KEMP-PIP, a hybrid machine…

Quantitative Methods · Quantitative Biology 2026-02-25 Soumik Deb Niloy , Md. Fahmid-Ul-Alam Juboraj , Swakkhar Shatabda

In settings where only a budgeted amount of labeled data can be afforded, active learning seeks to devise query strategies for selecting the most informative data points to be labeled, aiming to enhance learning algorithms' efficiency and…

Machine Learning · Computer Science 2024-06-26 Valentin Margraf , Marcel Wever , Sandra Gilhuber , Gabriel Marques Tavares , Thomas Seidl , Eyke Hüllermeier

Scientific research follows multi-turn, multi-step workflows that require proactively searching the literature, consulting figures and tables, and integrating evidence across papers to align experimental settings and support reproducible…

Computation and Language · Computer Science 2026-04-08 Xuan Dong , Huanyang Zheng , Tianhao Niu , Zhe Han , Pengzhan Li , Bofei Liu , Zhengyang Liu , Guancheng Li , Qingfu Zhu , Wanxiang Che

Abstract: In our paper the new algorithm enhanced multi gradient Dilution Preparation (EMDP) is discussed. This new algorithm is reported with a lab on chip or digital Microfluidic biochip to operate multiple operation on a tiny chip. We…

Emerging Technologies · Computer Science 2021-10-04 Meenakshi Sanyal , Somenath Chakraborty

For safety-related applications, it is crucial to produce trustworthy deep neural networks whose prediction is associated with confidence that can represent the likelihood of correctness for subsequent decision-making. Existing dense binary…

Computer Vision and Pattern Recognition · Computer Science 2023-08-04 Jiawei Liu , Changkun Ye , Shan Wang , Ruikai Cui , Jing Zhang , Kaihao Zhang , Nick Barnes

Recent advancements in language models have started a new era of superior information retrieval and content generation, with embedding models playing an important role in optimizing data representation efficiency and performance. While…

We introduce a comprehensive framework for modeling single cell transcriptomic responses to perturbations, aimed at standardizing benchmarking in this rapidly evolving field. Our approach includes a modular and user-friendly model…

There has been rapid growth in biomedical literature, yet capturing the heterogeneity of the bibliographic information of these articles remains relatively understudied. Although graph mining research via heterogeneous graph neural networks…

Machine Learning · Computer Science 2023-08-28 Eric W Lee , Joyce C Ho

Mixed-integer programming (MIP) is a well-established framework for computer-aided molecular design (CAMD). By precisely encoding the molecular space and score functions, e.g., a graph neural network, the molecular design problem is…

Computational Engineering, Finance, and Science · Computer Science 2024-11-26 Shiqiang Zhang , Christian W. Feldmann , Frederik Sandfort , Miriam Mathea , Juan S. Campos , Ruth Misener

Sepsis is a life-threatening condition which requires rapid diagnosis and treatment. Traditional microbiological methods are time-consuming and expensive. In response to these challenges, deep learning algorithms were developed to identify…

Point supervision has become a scalable solution to address dense annotation for infrared small target detection, but its performance is limited by two coupled bottlenecks: unstable pseudo-label evolution in cluttered, low-contrast infrared…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Zhu Liu , Yuanhang Yao , Ping Qian , Zihang Chen , Risheng Liu