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Related papers: Left Atrial Segmentation with nnU-Net Using MRI

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Atrial fibrillation (AF) is the most common cardiac arrhythmia. Accurate segmentation of the left atrial (LA) and LA scars can provide valuable information to predict treatment outcomes in AF. In this paper, we proposed to automatically…

Image and Video Processing · Electrical Eng. & Systems 2023-04-28 Yuchen Zhang , Yanda Meng , Yalin Zheng

Left ventricle (LV) segmentation is critical for clinical quantification and diagnosis of cardiac images. In this work, we propose two novel deep learning architectures called LNU-Net and IBU-Net for left ventricle segmentation from…

Computer Vision and Pattern Recognition · Computer Science 2026-01-05 Wenhui Chu , Nikolaos V. Tsekos

Radiological imaging offers effective measurement of anatomy, which is useful in disease diagnosis and assessment. Previous study has shown that the left atrial wall remodeling can provide information to predict treatment outcome in atrial…

Computer Vision and Pattern Recognition · Computer Science 2018-12-07 Shuman Jia , Antoine Despinasse , Zihao Wang , Hervé Delingette , Xavier Pennec , Pierre Jaïs , Hubert Cochet , Maxime Sermesant

Segmentation of the left atrium (LA) is crucial for assessing its anatomy in both pre-operative atrial fibrillation (AF) ablation planning and post-operative follow-up studies. In this paper, we present a fully automated framework for left…

Computer Vision and Pattern Recognition · Computer Science 2019-02-28 Chen Chen , Wenjia Bai , Daniel Rueckert

Cardiac segmentation is a critical task in medical imaging, essential for detailed analysis of heart structures, which is crucial for diagnosing and treating various cardiovascular diseases. With the advent of deep learning, automated…

Image and Video Processing · Electrical Eng. & Systems 2025-01-07 Malitha Gunawardhana , Fangqiang Xu , Jichao Zhao

Late gadolinium enhancement magnetic resonance imaging (LGE-MRI) is used to visualise atrial fibrosis and scars, providing important information for personalised atrial fibrillation (AF) treatments. Since manual analysis and delineations of…

Image and Video Processing · Electrical Eng. & Systems 2025-04-04 Y. On , C. Galazis , C. Chiu , M. Varela

Anatomical and biophysical modeling of left atrium (LA) and proximal pulmonary veins (PPVs) is important for clinical management of several cardiac diseases. Magnetic resonance imaging (MRI) allows qualitative assessment of LA and PPVs…

Computer Vision and Pattern Recognition · Computer Science 2017-05-23 Aliasghar Mortazi , Rashed Karim , Kawal Rhode , Jeremy Burt , Ulas Bagci

Accurately segmenting left atrium in MR volume can benefit the ablation procedure of atrial fibrillation. Traditional automated solutions often fail in relieving experts from the labor-intensive manual labeling. In this paper, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2018-12-17 Cheng Bian , Xin Yang , Jianqiang Ma , Shen Zheng , Yu-An Liu , Reza Nezafat , Pheng-Ann Heng , Yefeng Zheng

Background: The aim of this study was to develop and evaluate a deep learning-based automated segmentation method for hepatic anatomy (i.e., parenchyma, tumors, portal vein, hepatic vein and biliary tree) from the hepatobiliary phase of…

Image and Video Processing · Electrical Eng. & Systems 2025-08-21 Karin A. Olthof , Matteo Fusagli , Bianca Güttner , Tiziano Natali , Bram Westerink , Stefanie Speidel , Theo J. M. Ruers , Koert F. D. Kuhlmann , Andrey Zhylka

Accurate segmentation of the left ventricle in echocardiography can enable fully automatic extraction of clinical measurements such as volumes and ejection fraction. While models configured by nnU-Net perform well, they are large and slow,…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Anders Kjelsrud , Lasse Løvstakken , Erik Smistad , Håvard Dalen , Gilles Van De Vyver

Segmenting left atrium in MR volume holds great potentials in promoting the treatment of atrial fibrillation. However, the varying anatomies, artifacts and low contrasts among tissues hinder the advance of both manual and automated…

Computer Vision and Pattern Recognition · Computer Science 2018-12-17 Xin Yang , Na Wang , Yi Wang , Xu Wang , Reza Nezafat , Dong Ni , Pheng-Ann Heng

Lesion segmentation is a crucial step of the radiomic workflow. Manual segmentation requires long execution time and is prone to variability, impairing the realisation of radiomic studies and their robustness. In this study, a deep-learning…

Segmentation of cardiac structures is one of the fundamental steps to estimate volumetric indices of the heart. This step is still performed semi-automatically in clinical routine, and is thus prone to inter- and intra-observer variability.…

Accurate left atrium (LA) segmentation from pre-operative scans is crucial for diagnosing atrial fibrillation, treatment planning, and supporting surgical interventions. While deep learning models are key in medical image segmentation, they…

Image and Video Processing · Electrical Eng. & Systems 2024-11-15 Bipasha Kundu , Bidur Khanal , Richard Simon , Cristian A. Linte

Accurate segmentation of the left atrium (LA) from late gadolinium-enhanced magnetic resonance imaging plays a vital role in visualizing diseased atrial structures, enabling the diagnosis and management of cardiovascular diseases. It is…

Computer Vision and Pattern Recognition · Computer Science 2025-02-11 Bipasha Kundu , Zixin Yang , Richard Simon , Cristian Linte

Left atrial (LA) segmentation from late gadolinium enhanced magnetic resonance imaging (LGE MRI) is a crucial step needed for planning the treatment of atrial fibrillation. However, automatic LA segmentation from LGE MRI is still…

Image and Video Processing · Electrical Eng. & Systems 2021-07-06 Lei Li , Veronika A. Zimmer , Julia A. Schnabel , Xiahai Zhuang

Accurate segmentation and localization of left atrial (LA) ablation scars from Late gadolinium enhancement (LGE)-MRI is essential for assessing the lesion completeness and guiding ablation therapy. Incomplete or discontinuous lesions can…

Image and Video Processing · Electrical Eng. & Systems 2026-05-01 Bipasha Kundu , Cristian Linte

Accurate segmentation of the prostate gland in multiparametric MRI (mpMRI) is a fundamental step for a wide range of clinical and research applications, including image registration, volume estimation, and radiomic analysis. However, manual…

Computer Vision and Pattern Recognition · Computer Science 2026-04-03 Pablo Rodriguez-Belenguer , Gloria Ribas , Javier Aquerreta Escribano , Rafael Moreno-Calatayud , Leonor Cerda-Alberich , Luis Marti-Bonmati

Biomedical imaging is a driver of scientific discovery and core component of medical care, currently stimulated by the field of deep learning. While semantic segmentation algorithms enable 3D image analysis and quantification in many…

Computer Vision and Pattern Recognition · Computer Science 2020-12-09 Fabian Isensee , Paul F. Jäger , Simon A. A. Kohl , Jens Petersen , Klaus H. Maier-Hein

Automatic brain tissue segmentation from Magnetic Resonance Imaging (MRI) images is vital for accurate diagnosis and further analysis in medical imaging. Despite advancements in segmentation techniques, a comprehensive comparison between…

Image and Video Processing · Electrical Eng. & Systems 2024-11-11 Mohammad Imran Hossain , Muhammad Zain Amin , Daniel Tweneboah Anyimadu , Taofik Ahmed Suleiman
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