English

LU-Net: a multi-task network to improve the robustness of segmentation of left ventriclular structures by deep learning in 2D echocardiography

Image and Video Processing 2020-04-07 v1 Machine Learning Machine Learning

Abstract

Segmentation of cardiac structures is one of the fundamental steps to estimate volumetric indices of the heart. This step is still performed semi-automatically in clinical routine, and is thus prone to inter- and intra-observer variability. Recent studies have shown that deep learning has the potential to perform fully automatic segmentation. However, the current best solutions still suffer from a lack of robustness. In this work, we introduce an end-to-end multi-task network designed to improve the overall accuracy of cardiac segmentation while enhancing the estimation of clinical indices and reducing the number of outliers. Results obtained on a large open access dataset show that our method outperforms the current best performing deep learning solution and achieved an overall segmentation accuracy lower than the intra-observer variability for the epicardial border (i.e. on average a mean absolute error of 1.5mm and a Hausdorff distance of 5.1mm) with 11% of outliers. Moreover, we demonstrate that our method can closely reproduce the expert analysis for the end-diastolic and end-systolic left ventricular volumes, with a mean correlation of 0.96 and a mean absolute error of 7.6ml. Concerning the ejection fraction of the left ventricle, results are more contrasted with a mean correlation coefficient of 0.83 and an absolute mean error of 5.0%, producing scores that are slightly below the intra-observer margin. Based on this observation, areas for improvement are suggested.

Keywords

Cite

@article{arxiv.2004.02043,
  title  = {LU-Net: a multi-task network to improve the robustness of segmentation of left ventriclular structures by deep learning in 2D echocardiography},
  author = {Sarah Leclerc and Erik Smistad and Andreas Østvik and Frederic Cervenansky and Florian Espinosa and Torvald Espeland and Erik Andreas Rye Berg and Thomas Grenier and Carole Lartizien and Pierre-Marc Jodoin and Lasse Lovstakken and Olivier Bernard},
  journal= {arXiv preprint arXiv:2004.02043},
  year   = {2020}
}