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We introduceGraphGPT, a novel self-supervised generative pre-trained model for graph learning based on the Graph Eulerian Transformer (GET). First, we propose GET, which combines a standard transformer encoder or decoder architecture with…

Machine Learning · Computer Science 2025-06-09 Qifang Zhao , Weidong Ren , Tianyu Li , Hong Liu , Xingsheng He , Xiaoxiao Xu

The COVID-19 pandemic has profoundly affected global health, driven by the remarkable transmissibility and mutational adaptability of the SARS-CoV-2 virus. Although five variants of concern, Alpha, Beta, Gamma, Delta, and Omicron, have been…

Genomics · Quantitative Biology 2026-05-07 Bo Jing , Kai-Rui Zhang , Hong-Li Zeng , Erik Aurell

Recently, the pre-trained Transformer models have received a rising interest in the field of speech processing thanks to their great success in various downstream tasks. However, most fine-tuning approaches update all the parameters of the…

Audio and Speech Processing · Electrical Eng. & Systems 2022-10-31 Junyi Peng , Themos Stafylakis , Rongzhi Gu , Oldřich Plchot , Ladislav Mošner , Lukáš Burget , Jan Černocký

During a virus's evolution,various regions of the genome are subjected to distinct levels of functional constraints.Combined with factors like codon bias and DNA repair efficiency,these constraints contribute to unique mutation patterns…

Quantitative Methods · Quantitative Biology 2024-12-25 Vishwajeet Marathe , Deewan Bajracharya , Changhui Yan

Deep learning based transient stability assessment (TSA) has achieved great success, yet the lack of interpretability hinders its industrial application. Although a great number of studies have tried to explore the interpretability of…

Systems and Control · Electrical Eng. & Systems 2024-04-04 Hanxuan Wang , Na Lu , Zixuan Wang , Jiacheng Liu , Jun Liu

We study whether a Large Language Model can learn the deterministic sequence of trees generated by the iterated prime factorization of the natural numbers. Each integer is mapped into a rooted planar tree and the resulting sequence $…

Artificial Intelligence · Computer Science 2025-12-02 Alessandro Breccia , Federica Gerace , Marco Lippi , Gabriele Sicuro , Pierluigi Contucci

Many recent studies have focused on fine-tuning pre-trained models for speech emotion recognition (SER), resulting in promising performance compared to traditional methods that rely largely on low-level, knowledge-inspired acoustic…

Sound · Computer Science 2024-02-15 Tiantian Feng , Shrikanth Narayanan

To achieve deep natural language understanding, syntactic constituent parsing plays a crucial role and is widely required by many artificial intelligence systems for processing both text and speech. A recent approach involves using standard…

Computation and Language · Computer Science 2026-05-14 Daniel Fernández-González , Cristina Outeiriño Cid

Parameter-efficient tuning aims at updating only a small subset of parameters when adapting a pretrained model to downstream tasks. In this work, we introduce PASTA, in which we only modify the special token representations (e.g., [SEP] and…

Computation and Language · Computer Science 2023-02-15 Xiaocong Yang , James Y. Huang , Wenxuan Zhou , Muhao Chen

Parameter-Efficient Fine-Tuning (PEFT) methods, such as Low-Rank Adaptation (LoRA), have significantly reduced the number of trainable parameters needed in fine-tuning large language models (LLMs). The developments of LoRA-style adapters…

Machine Learning · Computer Science 2026-04-15 Yuxuan Gu , Wuyang Zhou , Giorgos Iacovides , Danilo Mandic

Transformer-based pretrained models like BERT, GPT-2 and T5 have been finetuned for a large number of natural language processing (NLP) tasks, and have been shown to be very effective. However, while finetuning, what changes across layers…

Computation and Language · Computer Science 2023-11-09 Pavan Kalyan Reddy Neerudu , Subba Reddy Oota , Mounika Marreddy , Venkateswara Rao Kagita , Manish Gupta

Recently, pre-trained models have been the dominant paradigm in natural language processing. They achieved remarkable state-of-the-art performance across a wide range of related tasks, such as textual entailment, natural language inference,…

Computation and Language · Computer Science 2019-05-21 Dongfang Li , Yifei Yu , Qingcai Chen , Xinyu Li

Machine learning and data processing techniques relying on covariance information are widespread as they identify meaningful patterns in unsupervised and unlabeled settings. As a prominent example, Principal Component Analysis (PCA)…

Machine Learning · Computer Science 2025-12-04 Andrea Cavallo , Ayushman Raghuvanshi , Sundeep Prabhakar Chepuri , Elvin Isufi

Real-world time series often exhibit a non-stationary nature, degrading the performance of pre-trained forecasting models. Test-Time Adaptation (TTA) addresses this by adjusting models during inference, but existing methods typically update…

Machine Learning · Computer Science 2025-07-01 Heitor R. Medeiros , Hossein Sharifi-Noghabi , Gabriel L. Oliveira , Saghar Irandoust

Recently, the scale of transformers has grown rapidly, which introduces considerable challenges in terms of training overhead and inference efficiency in the scope of task adaptation. Existing works, namely Parameter-Efficient Fine-Tuning…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Yizhe Xiong , Hui Chen , Tianxiang Hao , Zijia Lin , Jungong Han , Yuesong Zhang , Guoxin Wang , Yongjun Bao , Guiguang Ding

Large-scale self-supervised Pre-Trained Models (PTMs) have shown significant improvements in the speaker verification (SV) task by providing rich feature representations. In this paper, we utilize w2v-BERT 2.0, a model with approximately…

Audio and Speech Processing · Electrical Eng. & Systems 2026-03-10 Ze Li , Ming Cheng , Ming Li

Learning vector representations for programs is a critical step in applying deep learning techniques for program understanding tasks. Various neural network models are proposed to learn from tree-structured program representations, e.g.,…

Software Engineering · Computer Science 2023-01-10 Wenhan Wang , Kechi Zhang , Ge Li , Shangqing Liu , Anran Li , Zhi Jin , Yang Liu

Positron emission tomography (PET) serves as an essential tool for diagnosis of encephalopathy and brain science research. However, it suffers from the limited choice of tracers. Nowadays, with the wide application of PET imaging in…

The genetic evolution of SARS-CoV-2 has caused recurring epidemic waves, understanding its global dispersal patterns is critical for effective surveillance. We developed the Site-based mutation dynamics - Equal Power Sampling (S-EPS)…

Understanding trajectory diversity is a fundamental aspect of addressing practical traffic tasks. However, capturing the diversity of trajectories presents challenges, particularly with traditional machine learning and recurrent neural…

Artificial Intelligence · Computer Science 2023-12-04 Ruyi Feng , Zhibin Li , Bowen Liu , Yan Ding