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Proteomic matrix-assisted laser desorption/ionisation (MALDI) linear time-of-flight (TOF) mass spectrometry (MS) may be used to produce protein profiles from biological samples with the aim of discovering biomarkers for disease. However,…

Quantitative Methods · Quantitative Biology 2016-03-24 Tyman E. Stanford , Christopher J. Bagley , Patty J. Solomon

The inelastic electron tunneling spectrum (IETS)of highly oriented pyrolitic graphite (HOPG) has been measured with scanning tunneling spectroscopy (STS) at 6K. The observed spectral features are in very good agreement with the vibrational…

Condensed Matter · Physics 2009-11-10 L. Vitali , M. A. Schneider , K. Kern , L. Wirtz , A. Rubio

We describe PromptBoosting, a query-efficient procedure for building a text classifier from a neural language model (LM) without access to the LM's parameters, gradients, or hidden representations. This form of "black-box" classifier…

Computation and Language · Computer Science 2023-07-04 Bairu Hou , Joe O'Connor , Jacob Andreas , Shiyu Chang , Yang Zhang

Motivation: Flow Injection Analysis coupled to High-Resolution Mass Spectrometry (FIA-HRMS) is a promising approach for high-throughput metabolomics. FIA-HRMS data, however, cannot be preprocessed with current software tools which rely on…

Quantitative Methods · Quantitative Biology 2017-08-15 Alexis Delabrière , Ulli Hohenester , Benoit Colsch , Christophe Junot , François Fenaille , Etienne Thévenot

Phosphorus is a crucial element for the development of life, but so far P-bearing molecules have been detected only in a few astrophysical objects, hence its interstellar chemistry is almost totally unknown. Here we show new detections of…

Astrophysics of Galaxies · Physics 2016-05-25 F. Fontani , V. M. Rivilla , P. Caselli , A. Vasyunin , Aina Palau

Inverse protein folding, the process of designing sequences that fold into a specific 3D structure, is crucial in bio-engineering and drug discovery. Traditional methods rely on experimentally resolved structures, but these cover only a…

Biomolecules · Quantitative Biology 2023-11-27 Igor Melnyk , Aurelie Lozano , Payel Das , Vijil Chenthamarakshan

We consider a dose-optimization design for first-in-human oncology trial that aims to identify a suitable dose for late-phase drug development. The proposed approach, called the Pharmacometrics-Enabled DOse OPtimization (PEDOOP) design,…

Applications · Statistics 2024-06-19 Shijie Yuan , Zhanbo Huang , Jiaxin Liu , Yuan Ji

Soft prompt tuning achieves superior performances across a wide range of few-shot tasks. However, the performances of prompt tuning can be highly sensitive to the initialization of the prompts. We also empirically observe that conventional…

Computation and Language · Computer Science 2023-06-09 Junda Wu , Tong Yu , Rui Wang , Zhao Song , Ruiyi Zhang , Handong Zhao , Chaochao Lu , Shuai Li , Ricardo Henao

We propose a novel architecture with a remote phosphor based modular and compact light source in a non-contact dermoscope prototype for skin cancer screening. The spectrum and color temperature of the output light can easily and…

Medical Physics · Physics 2014-06-05 Chandrajit Basu , Sebastian Schlangen , Merve Meinhardt-Wollweber , Bernhard Roth

Time-periodic light field has emerged as a control knob for manipulating quantum states in solid-state materials, cold atoms and photonic systems via hybridization with photon-dressed Floquet states in the strong coupling limit, dubbed as…

The HTRU-S Low Latitude survey data within 1$^{\circ}$of the Galactic Centre (GC) were searched for pulsars using the Fast Folding Algorithm (FFA). Unlike traditional Fast Fourier Transform (FFT) pipelines, the FFA optimally folds the data…

Test-time prompt tuning for vision-language models has demonstrated impressive generalization capabilities under zero-shot settings. However, tuning the learnable prompts solely based on unlabeled test data may induce prompt optimization…

Machine Learning · Computer Science 2025-11-18 Fei Song , Yi Li , Rui Wang , Jiahuan Zhou , Changwen Zheng , Jiangmeng Li

Soft prompt tuning leverages continuous embeddings to capture task-specific information in large pre-trained language models (LLMs), achieving competitive performance in few-shot settings. However, soft prompts rely on high-dimensional,…

Computation and Language · Computer Science 2026-02-19 Zhenzhen Huang , Chaoning Zhang , Haoyu Bian , Songbo Zhang , Chi-lok Andy Tai , Jiaquan Zhang , Caiyan Qin , Jingjing Qu , Yalan Ye , Yang Yang , Heng Tao Shen

Time-periodic light field can dress the electronic states and lead to light-induced emergent properties in quantum materials. While below-gap pumping is regarded favorable for Floquet engineering, so far direct experimental evidence of…

Mesoscale and Nanoscale Physics · Physics 2023-09-21 Shaohua Zhou , Changhua Bao , Benshu Fan , Fei Wang , Haoyuan Zhong , Hongyun Zhang , Peizhe Tang , Wenhui Duan , Shuyun Zhou

Mass spectrometry (MS) is essential for proteomics and metabolomics but faces impending challenges in efficiently processing the vast volumes of data. This paper introduces SpecPCM, an in-memory computing (IMC) accelerator designed to…

Hardware Architecture · Computer Science 2024-11-18 Keming Fan , Ashkan Moradifirouzabadi , Xiangjin Wu , Zheyu Li , Flavio Ponzina , Anton Persson , Eric Pop , Tajana Rosing , Mingu Kang

The interface between liquid water and the Pt(111) metal surface is characterized structurally and thermodynamically via reactive molecular dynamics (MD) simulations within the ReaxFF framework. The formation of a distinct buckled adsorbate…

Chemical Physics · Physics 2021-03-19 Christoph Karsten Jung , Laura Braunwarth , Andrey Sinyavskiy , Timo Jacob

We present a new method LiST is short for Lite Prompted Self-Training for parameter-efficient fine-tuning of large pre-trained language models (PLMs) for few-shot learning. LiST improves over recent methods that adopt prompt-based…

Computation and Language · Computer Science 2022-05-20 Yaqing Wang , Subhabrata Mukherjee , Xiaodong Liu , Jing Gao , Ahmed Hassan Awadallah , Jianfeng Gao

Phosphorus-based lubricant additives are used for protecting metallic contacts under boundary lubrication by forming surface films that reduce wear and friction. Despite their importance, the molecular mechanisms driving their…

Materials Science · Physics 2025-12-30 Paolo Restuccia , Enrico Pedretti , Francesca Benini , Sophie Loehlé , M. Clelia Righi

The possibility of performing time-resolved spectroscopic studies in the molecular fingerprinting region or extending the cut-off wavelength of high-harmonic generation has recently boosted the development of efficient mid-infrared…

Optics · Physics 2020-11-11 Sébastien Loranger , Philip St. J. Russell , David Novoa

Photo-induced phase transitions (PIPTs) provide an ultrafast, energy-efficient way for precisely manipulating the topological properties of transition-metal ditellurides, and can be used to stabilize a topological phase in an otherwise…

Materials Science · Physics 2020-06-23 Bo Peng , Hao Zhang , Weiwen Chen , Zhi-Jun Qiu , Hezhu Shao , Heyuan Zhu , Bartomeu Monserrat , Desheng Fu , Hongming Weng