English
Related papers

Related papers: Phospho-Proteomics Method Optimization and Applica…

200 papers

Apoptosis is essential for numerous processes, such as development, resistance to infections, and suppression of tumorigenesis. Here, we investigate the influence of the nutrient sensing and longevity-assuring enzyme SIRT6 on the dynamics…

Quantitative Methods · Quantitative Biology 2017-11-22 Sergii Domanskyi , Justin W. Nicholatos , Joshua E. Schilling , Vladimir Privman , Sergiy Libert

Phosphorescent metal complexes have been under intense investigations as emissive dopants for energy efficient organic light emitting diodes (OLEDs). Among them, cyclometalated Pt(II) complexes are widespread triplet emitters with…

Machine Learning · Computer Science 2023-01-16 Shuai Wang , ChiYung Yam , Shuguang Chen , Lihong Hu , Liping Li , Faan-Fung Hung , Jiaqi Fan , Chi-Ming Che , GuanHua Chen

In the post-genome era, biologists have sought to measure the complete complement of proteins, termed proteomics. Currently, the most effective method to measure the proteome is with shotgun, or bottom-up, proteomics, in which the proteome…

Genomics · Quantitative Biology 2018-11-30 Jesse G. Meyer

Data-free knowledge distillation (DFKD) conducts knowledge distillation via eliminating the dependence of original training data, and has recently achieved impressive results in accelerating pre-trained language models. At the heart of DFKD…

Computation and Language · Computer Science 2022-05-17 Xinyin Ma , Xinchao Wang , Gongfan Fang , Yongliang Shen , Weiming Lu

The Hodrick-Prescott (HP) filter is one of the most widely used econometric methods in applied macroeconomic research. Like all nonparametric methods, the HP filter depends critically on a tuning parameter that controls the degree of…

Econometrics · Economics 2020-11-26 Peter C. B. Phillips , Zhentao Shi

Revived attention in black phosphorus (bP) has been tremendous in the past decade. While many photoinitiated experiments have been conducted, a cross-examination of bP's photocarrier and structural dynamics is still lacking. In this report,…

Materials Science · Physics 2023-05-24 Mazhar Chebl , Xing He , Ding-Shyue Yang

A ubiquitous building block of signaling pathways is a cycle of covalent modification (e.g., phosphorylation and dephosphorylation in MAPK cascades). Our paper explores the kind of information processing and filtering that can be…

Molecular Networks · Quantitative Biology 2015-05-13 Carlos Gomez-Uribe , George C. Verghese , Leonid A. Mirny

Finding cost-effective and efficient photocatalytic materials able to catalyse the water splitting reaction under visible light is one of the greatest challenges in current environmental material science. Despite that many photocatalysts…

Materials Science · Physics 2022-07-27 Zhao Liu , Biao Wang , Dewei Chu , Claudio Cazorla

Understanding the ultrafast vibrational relaxation following photoexcitation of molecules in a condensed phase is essential to predict the outcome and improve the efficiency of photoinduced molecular processes. Here, the vibrational…

Chemical Physics · Physics 2025-02-18 Benedikt O Birgisson , Asmus Ougaard Dohn , Hannes Jónsson , Gianluca Levi

Thermal quenching (TQ) generally occurs in phosphors and is ascribed to the activation of non-radiative transitions at elevated temperatures. This effect limits the use of most phosphors in high-power/high-temperature applications, such as…

Materials Science · Physics 2026-02-27 Baowei Zhang , Liberato Manna

A method for the optimisation and advanced studies of a laser-plasma electron injector is presented, based on a truncated ionisation injection scheme for high quality beam production. The SMILEI code is used with laser envelope…

A fraud scorer needs to answer in under 2 ms. The best tabular foundation models (TFMs) take 151-1,275 ms on GPU. We close this gap by distilling the TFM offline into an XGBoost or CatBoost student that runs natively on CPU. The central…

Machine Learning · Computer Science 2026-05-19 Aditya Tanna , Nassim Bouarour , Mohamed Bouadi , Vinay kumar Sankarapu , Pratinav Seth

Thin-layer photobioreactors (TLRs) exhibit fast hydrodynamic and thermal dynamics, strong nonlinear photosynthetic responses and significant time-variability due to irradiance fluctuations and biomass growth. These characteristics challenge…

Systems and Control · Electrical Eng. & Systems 2026-05-26 José González-Hernández , Ainoa Morillas-España , José Luis Guzmán , José Carlos Moreno , Alain Vande Wouwer

Fast procedures for the beam quality assessment and for the monitoring of beam energy modulations during the irradiation are among the most urgent improvements in particle therapy. Indeed, the online measurement of the particle beam energy…

This study introduces a novel application of a Generative Pre-trained Transformer (GPT) model tailored for photoplethysmography (PPG) signals, serving as a foundation model for various downstream tasks. Adapting the standard GPT…

Machine Learning · Computer Science 2025-03-12 Zhaoliang Chen , Cheng Ding , Saurabh Kataria , Runze Yan , Minxiao Wang , Randall Lee , Xiao Hu

Lck (lymphocyte-specific protein tyrosine kinase) is an enzyme which plays a number of important roles in the function of immune cells. It belongs to the Src family of kinases which are known to undergo autophosphorylation. It turns out…

Molecular Networks · Quantitative Biology 2021-01-26 Lisa Maria Kreusser , Alan D. Rendall

RNA molecules exhibit various biological functions intrinsically dependent on their diverse ecosystem of highly flexible structures. This flexibility arises from complex hydrogen-bonding networks defined by canonical and non-canonical base…

Biomolecules · Quantitative Biology 2024-11-08 Tomas F. D. Silva , Giovanni Bussi

Large Language Models (LLMs) have demonstrated remarkable performance across various natural language processing (NLP) tasks. However, their deployment is challenging due to the substantial computational resources required. Power-of-two…

Computation and Language · Computer Science 2025-07-17 Xinyu Wang , Vahid Partovi Nia , Peng Lu , Jerry Huang , Xiao-Wen Chang , Boxing Chen , Yufei Cui

To manipulate the protein population at certain functional state through chemical stabilizers is crucial for protein-related studies. It not only plays a key role in protein structure analysis and protein folding kinetics, but also affects…

Biomolecules · Quantitative Biology 2024-08-13 Mengshou Wang , Liangrong Pengb , Baoguo Jia , Liu Hong

X-ray phase-contrast imaging has experienced rapid development over the last few decades, and in this technology, the phase modulation strategy of phase-stepping is used most widely to measure the sample's phase signal. However, because of…

Medical Physics · Physics 2017-12-06 Faiz Wali , Shenghao Wang , Huajie Han , Kun Gao , Zhao Wu , Peiping Zhu , Yangchao Tiana