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Multiscale systems are ubiquitous in science and technology, but are notoriously challenging to simulate as short spatiotemporal scales must be appropriately linked to emergent bulk physics. When expensive high-dimensional dynamical systems…

Machine Learning · Computer Science 2025-12-30 Quercus Hernandez , Max Win , Thomas C. O'Connor , Paulo E. Arratia , Nathaniel Trask

Mass spectrometry (MS) stands as a cornerstone analytical technique for molecular identification, yet de novo structure elucidation from spectra remains challenging due to the combinatorial complexity of chemical space and the inherent…

Machine Learning · Computer Science 2026-03-20 Jianan Nie , Peng Gao

In recent years, multimodal medical data-based survival analysis has attracted much attention. However, real-world datasets often suffer from the problem of incomplete modality, where some patient modality information is missing due to…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Yi Yin , Yuntao Shou , Zao Dai , Yun Peng , Tao Meng , Wei Ai , Keqin Li

Methods to extract information from the tracking of mobile objects/particles have broad interest in biological and physical sciences. Techniques based on simple criteria of proximity in time-consecutive snapshots are useful to identify the…

Data Analysis, Statistics and Probability · Physics 2015-03-13 M. Chertkov , L. Kroc , F. Krzakala , M. Vergassola , L. Zdeborová

Multiphase flows are characterized by sharp moving interfaces, separating different fluids or phases. In many cases the dynamics of the interface determines the behavior of the flow. In a coarse, or reduced order model, it may therefore be…

Fluid Dynamics · Physics 2021-08-12 Xianyang Chen , Jiacai Lu , Gretar Tryggvason

Coarse-grained molecular models of proteins permit access to length and time scales unattainable by all-atom models and the simulation of processes that occur on long-time scales such as aggregation and folding. The reduced resolution…

Biomolecules · Quantitative Biology 2023-07-25 Michael S. Jones , Kirill Shmilovich , Andrew L. Ferguson

Generating molecular graphs is crucial in drug design and discovery but remains challenging due to the complex interdependencies between nodes and edges. While diffusion models have demonstrated their potentiality in molecular graph design,…

Machine Learning · Computer Science 2024-11-11 Xiaoyang Hou , Tian Zhu , Milong Ren , Dongbo Bu , Xin Gao , Chunming Zhang , Shiwei Sun

Recent studies have shown that entrainment effectively describes the behaviour of natural and forced separating/reattaching flows developing behind bluff bodies, potentially paving the way to new, scalable separation control strategies. In…

Fluid Dynamics · Physics 2019-08-12 Francesco Stella , Nicolas Mazellier , Pierric Joseph , Azeddine Kourta

One of the challenges encountered by computational simulations at exascale is the reliability of simulations in the face of hardware and software faults. These faults, expected to increase with the complexity of the computational systems,…

Fluid Dynamics · Physics 2019-02-19 Marc T. Henry de Frahan , Ray W. Grout

There is a simple and general experimental protocol to generate slow granular flows that exhibit wide shear zones, qualitatively different from the narrow shear bands that are usually observed in granular materials . The essence is to drive…

Soft Condensed Matter · Physics 2018-10-22 Joshua A. Dijksman , Martin van Hecke

Statistical tools are crucial for studying and modeling turbulent flows, where chaotic velocity fluctuations span a wide range of spatial and temporal scales. Advances in image velocimetry, especially in tracking-based methods, now allow…

Fluid Dynamics · Physics 2025-02-19 Miguel A. Mendez , Manuel Ratz , Damien Rigutto

A recently introduced systematic approach to derivations of the macroscopic dynamics from the underlying microscopic equations of motions in the short-memory approximation [Gorban et al, Phys. Rev. E, 63, 066124 (2001)] is presented in…

Statistical Mechanics · Physics 2007-05-23 Iliya V. Karlin , Larisa L. Tatarinova , Alexander N. Gorban , Hans Christian Ottinger

Machine learning (ML) offers considerable promise for the design of new molecules and materials. In real-world applications, the design problem is often domain-specific, and suffers from insufficient data, particularly labeled data, for ML…

Chemical Physics · Physics 2025-02-04 Ming Han , Ge Sun , Juan J. de Pablo

Given the growth in the variety and precision of astronomical datasets of interest for cosmology, the best cosmological constraints are invariably obtained by combining data from different experiments. At the likelihood level, one…

Cosmology and Nongalactic Astrophysics · Physics 2024-09-04 Arrykrishna Mootoovaloo , Carlos García-García , David Alonso , Jaime Ruiz-Zapatero

We introduce Categorical Flow Maps, a flow-matching method for accelerated few-step generation of categorical data via self-distillation. Building on recent variational formulations of flow matching and the broader trend towards accelerated…

Accurate polyp segmentation remains challenging due to irregular lesion morphologies, ambiguous boundaries, and heterogeneous imaging conditions. While U-Net variants excel at local feature fusion, they often lack explicit mechanisms to…

Image and Video Processing · Electrical Eng. & Systems 2025-02-27 Pu Wang , Huaizhi Ma , Zhihua Zhang , Zhuoran Zheng

Dataset distillation seeks to synthesize a highly compact dataset that achieves performance comparable to the original dataset on downstream tasks. For the classification task that use pre-trained self-supervised models as backbones,…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Qianxin Xia , Jiawei Du , Xin Zhang , Yuhan Zhang , Jielei Wang , Guoming Lu

Networks of interconnected resistors, springs and beams, or pores are standard models of studying scalar and vector transport processes in heterogeneous materials and media, such as fluid flow in porous media, and conduction, deformations,…

Computational Physics · Physics 2019-08-12 Hassan Dashtian , Muhammad Sahimi

Turbulent flow over permeable interface is omnipresent featuring complex flow topology. In this work, a data driven, end to end machine learning model has been developed to model the turbulent flow in porous media. For the same, we have…

Fluid Dynamics · Physics 2023-11-28 Xu Chu , Sandeep Pandey

Flow and diffusion-based models have emerged as powerful tools for scientific applications, particularly for sampling non-normalized probability distributions, as exemplified by Boltzmann Generators (BGs). A critical challenge in deploying…

Machine Learning · Statistics 2025-10-27 Johann Flemming Gloy , Simon Olsson
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