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Metric learning has the aim to improve classification accuracy by learning a distance measure which brings data points from the same class closer together and pushes data points from different classes further apart. Recent research has…

Machine Learning · Computer Science 2018-07-17 Benjamin Paaßen , Claudio Gallicchio , Alessio Micheli , Barbara Hammer

Embedding tree-like data, from hierarchies to ontologies and taxonomies, forms a well-studied problem for representing knowledge across many domains. Hyperbolic geometry provides a natural solution for embedding trees, with vastly superior…

Machine Learning · Computer Science 2025-02-25 Max van Spengler , Pascal Mettes

We consider the problem of augmenting an n-vertex graph embedded in a metric space, by inserting one additional edge in order to minimize the diameter of the resulting graph. We present exact algorithms for the cases when (i) the input…

Computational Geometry · Computer Science 2016-07-20 Ulrike Große , Joachim Gudmundsson , Christian Knauer , Michiel Smid , Fabian Stehn

A fundamental question in computational geometry is for a set of input points in the Euclidean space, that is subject to discrete changes (insertion/deletion of points at each time step), whether it is possible to maintain an approximate…

Computational Geometry · Computer Science 2023-02-22 A. Karim Abu-Affash , Sujoy Bhore , Paz Carmi

Metric embeddings are a widely used method in algorithm design, where generally a ``complex'' metric is embedded into a simpler, lower-dimensional one. Historically, the theoretical computer science community has focused on bi-Lipschitz…

Data Structures and Algorithms · Computer Science 2025-05-19 Ainesh Bakshi , Vincent Cohen-Addad , Samuel B. Hopkins , Rajesh Jayaram , Silvio Lattanzi

Spanning trees of low average stretch on the non-tree edges, as introduced by Alon et al. [SICOMP 1995], are a natural graph-theoretic object. In recent years, they have found significant applications in solvers for symmetric diagonally…

Data Structures and Algorithms · Computer Science 2019-08-01 Sebastian Forster , Gramoz Goranci

The DBSCAN method for spatial clustering has received significant attention due to its applicability in a variety of data analysis tasks. There are fast sequential algorithms for DBSCAN in Euclidean space that take $O(n\log n)$ work for two…

Data Structures and Algorithms · Computer Science 2021-01-29 Yiqiu Wang , Yan Gu , Julian Shun

The $k$d-tree is one of the most widely used data structures to manage multi-dimensional data. Due to the ever-growing data volume, it is imperative to consider parallelism in $k$d-trees. However, we observed challenges in existing parallel…

Data Structures and Algorithms · Computer Science 2025-01-08 Ziyang Men , Zheqi Shen , Yan Gu , Yihan Sun

The wavelet tree has become a very useful data structure to efficiently represent and query large volumes of data in many different domains, from bioinformatics to geographic information systems. One problem with wavelet trees is their…

Data Structures and Algorithms · Computer Science 2016-10-20 José Fuentes-Sepúlveda , Erick Elejalde , Leo Ferres , Diego Seco

We show that every n-point tree metric admits a (1+eps)-embedding into a C(eps) log n-dimensional L_1 space, for every eps > 0, where C(eps) = O((1/eps)^4 log(1/eps)). This matches the natural volume lower bound up to a factor depending…

Metric Geometry · Mathematics 2011-09-07 James R. Lee , Arnaud de Mesmay , Mohammad Moharrami

The Euclidean Steiner tree problem asks to find a min-cost metric graph that connects a given set of \emph{terminal} points $X$ in $\mathbb{R}^d$, possibly using points not in $X$ which are called Steiner points. Even though near-linear…

Computational Geometry · Computer Science 2023-12-01 T-H. Hubert Chan , Gramoz Goranci , Shaofeng H. -C. Jiang , Bo Wang , Quan Xue

A $(1+\varepsilon)\textit{-stretch tree cover}$ of a metric space is a collection of trees, where every pair of points has a $(1+\varepsilon)$-stretch path in one of the trees. The celebrated $\textit{Dumbbell Theorem}$ [Arya et~al.…

Computational Geometry · Computer Science 2024-03-27 Hsien-Chih Chang , Jonathan Conroy , Hung Le , Lazar Milenkovic , Shay Solomon , Cuong Than

Fitting distances to tree metrics and ultrametrics are two widely used methods in hierarchical clustering, primarily explored within the context of numerical taxonomy. Given a positive distance function…

Data Structures and Algorithms · Computer Science 2025-04-25 Amir Carmel , Debarati Das , Evangelos Kipouridis , Evangelos Pipis

Existing parallel algorithms for wavelet tree construction have a work complexity of $O(n\log\sigma)$. This paper presents parallel algorithms for the problem with improved work complexity. Our first algorithm is based on parallel integer…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-17 Julian Shun

We present $O(\log^2 \log n)$ time 3-coloring, maximal independent set and maximal matching algorithms for trees in the Massively Parallel Computation (MPC) model. Our algorithms are deterministic, apply to arbitrary-degree trees and work…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-11-02 Rustam Latypov , Jara Uitto

The width measure treedepth, also known as vertex ranking, centered coloring and elimination tree height, is a well-established notion which has recently seen a resurgence of interest. Since graphs of bounded treedepth are more restricted…

Computational Complexity · Computer Science 2016-08-09 Li-Hsuan Chen , Felix Reidl , Peter Rossmanith , Fernando Sánchez Villaamil

The Subtree Isomorphism problem asks whether a given tree is contained in another given tree. The problem is of fundamental importance and has been studied since the 1960s. For some variants, e.g., ordered trees, near-linear time algorithms…

Computational Complexity · Computer Science 2015-10-16 Amir Abboud , Arturs Backurs , Thomas Dueholm Hansen , Virginia Vassilevska Williams , Or Zamir

In the \emph{$k$-Diameter-Optimally Augmenting Tree Problem} we are given a tree $T$ of $n$ vertices as input. The tree is embedded in an unknown \emph{metric} space and we have unlimited access to an oracle that, given two distinct…

Data Structures and Algorithms · Computer Science 2023-05-30 Davide Bilò , Luciano Gualà , Stefano Leucci , Luca Pepè Sciarria

The tree inclusion problem is, given two node-labeled trees $P$ and $T$ (the ``pattern tree'' and the ``target tree''), to locate every minimal subtree in $T$ (if any) that can be obtained by applying a sequence of node insertion operations…

Data Structures and Algorithms · Computer Science 2021-06-16 Tatsuya Akutsu , Jesper Jansson , Ruiming Li , Atsuhiro Takasu , Takeyuki Tamura

A tree-packing is a collection of spanning trees of a graph. It has been a useful tool for computing the minimum cut in static, dynamic, and distributed settings. In particular, [Thorup, Comb. 2007] used them to obtain his dynamic min-cut…

Data Structures and Algorithms · Computer Science 2024-12-05 Tijn de Vos , Aleksander B. G. Christiansen