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We present the results of a self-consistent, unified molecular dynamics study of simple model heteropolymers in the continuum with emphasis on folding, sequence design and the determination of the interaction parameters of the effective…

Statistical Mechanics · Physics 2009-10-31 Cecilia Clementi , Amos Maritan , Jayanth R. Banavar

We propose and analyze a new way of using $\pi$ stacking to design molecular junctions that either enhance or suppress a phononic heat current, but at the same time remain conductors for an electric current. Such functionality is highly…

Mesoscale and Nanoscale Physics · Physics 2015-02-10 Gediminas Kiršanskas , Qian Li , Karsten Flensberg , Gemma C. Solomon , Martin Leijnse

The increased energy and power density required in modern electronics poses a challenge for designing new dielectric polymer materials with high energy density while maintaining low loss at high applied electric fields. Recently, an…

The equations for strands of rigid charge configurations interacting nonlocally are formulated on the special Euclidean group, SE(3), which naturally generates helical conformations. Helical stationary shapes are found by minimizing the…

Mathematical Physics · Physics 2011-01-06 Steve Benoit , Darryl D. Holm , Vakhtang Putkaradze

To facilitate rational molecular and materials design, this research proposes an integrated computational framework that combines stochastic simulation, ab initio quantum chemistry, and molecular docking. The suggested workflow allows…

Materials Science · Physics 2026-01-08 Md Rakibul Karim Akanda , Michael P. Richard

We study the mechanical and conformational properties of networks of helical polymers with a combination of Monte Carlo simulations based on the Wang-Landau algorithm and the Three-chain Model. We find that the stress-strain behavior of…

Materials Science · Physics 2007-05-23 Gustavo A. Carri , Richard Batman , Vikas Varshney , Taner E. Dirama

A fascinating and open question challenging biochemistry, physics and even geometry is the presence of highly regular motifs such as alpha-helices in the folded state of biopolymers and proteins. Stimulating explanations ranging from…

Statistical Mechanics · Physics 2009-10-31 Amos Maritan , Cristian Micheletti , Jayanth R. Banavar

Magnetic composite materials i.e. elastomers, polymer gels, or polymer solutions with embedded magnetic nanoparticles are useful for many technical and bio-medical applications. However, the microscopic details of the coupling mechanisms…

Soft Condensed Matter · Physics 2020-10-30 Patrick Kreissl , Christian Holm , Rudolf Weeber

Leveraging strong optoelectronic responses to external stimuli, such as temperature and electric fields, is central to the development of advanced photonic technologies, including adaptive photodetectors and reconfigurable photovoltaic…

Materials Science · Physics 2026-02-25 Pol Benítez , Cibrán López , Edgardo Saucedo , Claudio Cazorla

The stability of chemically complex nanoparticles is governed by an immense configurational space arising from heterogeneous local atomic environments across surface and interior regions. Efficiently identifying low-energy configurations…

Ni/Al reactive multilayers are promising materials for applications requiring controlled local energy release and superior mechanical performance. This study systematically investigates the impact of compositional variations, ranging from…

Materials Science · Physics 2026-04-14 Nensi Toncich , Fabian Schwarz , Rebecca A. Gallivan , Jemma Gillon , Ralph Spolenak

The development of synthetic strategies to engineer \pi-conjugated polymers is of paramount importance in modern chemistry and materials science. Here we introduce a theoretical and experimental synthetic paradigm based on the search for…

Geopolymers present a sustainable alternative to conventional binders, however, their commercial viability is hindered by a lack of standardised methods for preparing stabile activator solutions; alkaline feedstocks critical to geopolymer…

Materials Science · Physics 2025-06-17 Ramon Skane , Franca Jones , Arie van Riessen , Evan Jamieson , Xiao Sun , William D. A. Rickard

Aromatic $\pi$-stacking interactions play an important role in both natural and artificial systems, influencing processes such as charge separation in photosynthesis and charge transport in organic semiconductors. Controlling the geometry…

Model-based process simulation can be used to derive designs and operating conditions of chemical processes that optimally balance multiple objectives, such as quality, costs, or environmental impacts. This work focuses on identifying…

Imaginary-time path integral (PI) is a rigorous tool to compute static properties at finite temperatures. However, the stiff PI internal modes poses a sampling challenge. This is commonly tackled using staging coordinates, in which the free…

Statistical Mechanics · Physics 2024-08-23 Sabry G. Moustafa , Andrew J. Schultz

Molecular dimers are widely utilized as a tool to investigate the structure-property relationships behind the complex photophysical processes of condensed-phase systems, where structural tuning remains a challenge. This approach often…

Although autonomous control of robotic manipulators has been studied for several decades, they are not commonly used in safety-critical applications due to lack of safety and performance guarantees - many of them concerning the modulation…

Robotics · Computer Science 2020-04-22 Lasitha Wijayarathne , Frank L. Hammond

Cooling methods and particle slowers as well as accelerators are basic tools for fundamental research and applications in different fields and systems. We put forward a generic mechanism to scale the momentum of a particle, regardless of…

Quantum Physics · Physics 2020-11-04 J. G. Muga , S. Martínez-Garaot , M. Pons , M. Palmero , A. Tobalina

The phase behavior of helical packings of thermoresponsive microspheres inside glass capillaries is studied as a function of volume fraction. Stable packings with long-range orientational order appear to evolve abruptly to disordered states…

Soft Condensed Matter · Physics 2010-04-14 Matthew A. Lohr , Ahmed M. Alsayed , Bryan G. Chen , Zexin Zhang , Randall D. Kamien , Arjun G. Yodh
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