English
Related papers

Related papers: Dynamic Dyck and Tree Edit Distance: Decomposition…

200 papers

The edit distance is a fundamental measure of sequence similarity, defined as the minimum number of character insertions, deletions, and substitutions needed to transform one string into the other. Given two strings of length at most $n$,…

Data Structures and Algorithms · Computer Science 2023-07-17 Tomasz Kociumaka , Anish Mukherjee , Barna Saha

String Edit Distance is a more-than-classical problem whose behavior in the dynamic setting, where the strings are updated over time, is well studied. A single-character substitution, insertion, or deletion can be processed in time…

Data Structures and Algorithms · Computer Science 2025-11-18 Bingbing Hu , Jakob Nogler , Barna Saha

A Dyck sequence is a sequence of opening and closing parentheses (of various types) that is balanced. The Dyck edit distance of a given sequence of parentheses $S$ is the smallest number of edit operations (insertions, deletions, and…

Data Structures and Algorithms · Computer Science 2022-08-23 Dvir Fried , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat , Tatiana Starikovskaya

The Dyck language, which consists of well-balanced sequences of parentheses, is one of the most fundamental context-free languages. The Dyck edit distance quantifies the number of edits (character insertions, deletions, and substitutions)…

Data Structures and Algorithms · Computer Science 2021-12-14 Debarati Das , Tomasz Kociumaka , Barna Saha

Computing the edit distance of two strings is one of the most basic problems in computer science and combinatorial optimization. Tree edit distance is a natural generalization of edit distance in which the task is to compute a measure of…

Data Structures and Algorithms · Computer Science 2022-09-16 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha , Hamed Saleh

Given two strings of length $n$ over alphabet $\Sigma$, and an upper bound $k$ on their edit distance, the algorithm of Myers (Algorithmica'86) and Landau and Vishkin (JCSS'88) computes the unweighted string edit distance in…

Data Structures and Algorithms · Computer Science 2023-02-09 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha

Edit distance between trees is a natural generalization of the classical edit distance between strings, in which the allowed elementary operations are contraction, uncontraction and relabeling of an edge. Demaine et al. [ACM Trans. on…

Data Structures and Algorithms · Computer Science 2018-04-27 Bartłomiej Dudek , Paweł Gawrychowski

Given a string $\sigma$ over alphabet $\Sigma$ and a grammar $G$ defined over the same alphabet, how many minimum number of repairs: insertions, deletions and substitutions are required to map $\sigma$ into a valid member of $G$ ? We…

Data Structures and Algorithms · Computer Science 2013-11-13 Barna Saha

The edit distance between two rooted ordered trees with $n$ nodes labeled from an alphabet~$\Sigma$ is the minimum cost of transforming one tree into the other by a sequence of elementary operations consisting of deleting and relabeling…

Data Structures and Algorithms · Computer Science 2017-03-28 Karl Bringmann , Paweł Gawrychowski , Shay Mozes , Oren Weimann

The {\em edit distance} between two ordered trees with vertex labels is the minimum cost of transforming one tree into the other by a sequence of elementary operations consisting of deleting and relabeling existing nodes, as well as…

Data Structures and Algorithms · Computer Science 2010-12-01 Erik D. Demaine , Shay Mozes , Benjamin Rossman , Oren Weimann

The tree edit distance is a natural dissimilarity measure between rooted ordered trees whose nodes are labeled over an alphabet $\Sigma$. It is defined as the minimum number of node edits (insertions, deletions, and relabelings) required to…

Data Structures and Algorithms · Computer Science 2025-07-04 Tomasz Kociumaka , Ali Shahali

An ordered labeled tree is a tree in which the nodes are labeled and the left-to-right order among siblings is relevant. The edit distance between two ordered labeled trees is the minimum cost of changing one tree into the other through a…

Data Structures and Algorithms · Computer Science 2015-02-10 Shihyen Chen

Edit distance is a fundamental measure of distance between strings and has been widely studied in computer science. While the problem of estimating edit distance has been studied extensively, the equally important question of actually…

Data Structures and Algorithms · Computer Science 2018-05-08 Moses Charikar , Ofir Geri , Michael P. Kim , William Kuszmaul

We give the first non-trivial fully dynamic probabilistic tree embedding algorithm for weighted graphs undergoing edge insertions and deletions. We obtain a trade-off between amortized update time and expected stretch against an oblivious…

Data Structures and Algorithms · Computer Science 2020-04-24 Sebastian Forster , Gramoz Goranci , Monika Henzinger

Tree edit distance is a well-studied measure of dissimilarity between rooted trees with node labels. It can be computed in $O(n^3)$ time [Demaine, Mozes, Rossman, and Weimann, ICALP 2007], and fine-grained hardness results suggest that the…

Data Structures and Algorithms · Computer Science 2021-06-11 Shyan Akmal , Ce Jin

Edit distance is a measure of similarity of two strings based on the minimum number of character insertions, deletions, and substitutions required to transform one string into the other. The edit distance can be computed exactly using a…

Data Structures and Algorithms · Computer Science 2021-02-17 Diptarka Chakraborty , Debarati Das , Elazar Goldenberg , Michal Koucky , Michael Saks

The edit distance of two strings is the minimum number of insertions, deletions, and substitutions needed to transform one string into the other. The textbook algorithm determines the edit distance of length-$n$ strings in $O(n^2)$ time,…

Data Structures and Algorithms · Computer Science 2025-02-04 Egor Gorbachev , Tomasz Kociumaka

The edit distance $ed(X,Y)$ of two strings $X,Y\in \Sigma^*$ is the minimum number of character edits (insertions, deletions, and substitutions) needed to transform $X$ into $Y$. Its weighted counterpart $ed^w(X,Y)$ minimizes the total cost…

Data Structures and Algorithms · Computer Science 2025-07-04 Itai Boneh , Egor Gorbachev , Tomasz Kociumaka

We present an algorithm for approximating the edit distance between two strings of length $n$ in time $n^{1+\varepsilon}$ up to a constant factor, for any $\varepsilon>0$. Our result completes a research direction set forth in the recent…

Data Structures and Algorithms · Computer Science 2022-07-18 Alexandr Andoni , Negev Shekel Nosatzki

Spanning trees of low average stretch on the non-tree edges, as introduced by Alon et al. [SICOMP 1995], are a natural graph-theoretic object. In recent years, they have found significant applications in solvers for symmetric diagonally…

Data Structures and Algorithms · Computer Science 2019-08-01 Sebastian Forster , Gramoz Goranci
‹ Prev 1 2 3 10 Next ›