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Recent advances in artificial intelligence, particularly large language models LLMs, have shown promising capabilities in transforming rare disease research. This survey paper explores the integration of LLMs in the analysis of rare…

Computation and Language · Computer Science 2025-05-26 Valentina Carbonari , Pierangelo Veltri , Pietro Hiram Guzzi

Transportation safety analysis requires integrating crash records, roadway attributes, and geospatial data through GIS-based workflows, but access remains uneven across agencies and community stakeholders. Technical prerequisites create a…

Computation and Language · Computer Science 2026-05-22 Mahdi Azhdari , Eric J. Gonzales

Recent works on form understanding mostly employ multimodal transformers or large-scale pre-trained language models. These models need ample data for pre-training. In contrast, humans can usually identify key-value pairings from a form only…

Computation and Language · Computer Science 2023-05-09 Bhanu Prakash Voutharoja , Lizhen Qu , Fatemeh Shiri

Text-attributed graphs (TAGs) integrate textual data with graph structures, providing valuable insights in applications such as social network analysis and recommendation systems. Graph Neural Networks (GNNs) effectively capture both…

Artificial Intelligence · Computer Science 2025-06-17 Yuefei Lyu , Chaozhuo Li , Xi Zhang , Tianle Zhang

Combining multiple knowledge graphs (KGs) across linguistic boundaries is a persistent challenge due to semantic heterogeneity and the complexity of graph environments. We propose a framework for cross-lingual graph fusion, leveraging the…

Computation and Language · Computer Science 2026-03-24 Kaung Myat Kyaw , Khush Agarwal , Jonathan Chan

Model interpretability is crucial for understanding and trusting the decisions made by complex machine learning models, such as those built with XGBoost. SHAP (SHapley Additive exPlanations) values have become a popular tool for…

Human-Computer Interaction · Computer Science 2026-03-04 Xianlong Zeng , Kewen Zhu

Understanding the behavior of large language models (LLMs) is crucial for ensuring their safe and reliable use. However, existing explainable AI (XAI) methods for LLMs primarily rely on word-level explanations, which are often…

Computation and Language · Computer Science 2025-08-08 Furui Cheng , Vilém Zouhar , Robin Shing Moon Chan , Daniel Fürst , Hendrik Strobelt , Mennatallah El-Assady

Large Language Models (LLMs) fine-tuned on serialized tabular data are emerging as powerful alternatives to traditional tree-based models, particularly for heterogeneous or context-rich datasets. However, their deployment in high-stakes…

Machine Learning · Computer Science 2026-04-24 Aryan Chaudhary , Prateek Agarwal , Tejasvi Alladi

Large-scale Pre-Trained Language Models (PTLMs) capture knowledge from massive human-written data which contains latent societal biases and toxic contents. In this paper, we leverage the primary task of PTLMs, i.e., language modeling, and…

Computation and Language · Computer Science 2023-01-24 Saghar Hosseini , Hamid Palangi , Ahmed Hassan Awadallah

Social media text shows promise for monitoring trends in the opioid overdose crisis; however, the overwhelming majority of social media text is unrelated to opioids. When leveraging social media text to monitor trends in the ongoing opioid…

Computation and Language · Computer Science 2026-03-12 Kristy A. Carpenter , Issah A. Samori , Mathew V. Kiang , Keith Humphreys , Anna Lembke , Johannes C. Eichstaedt , Russ B. Altman

Large Language Models (LLMs) have demonstrated substantial efficacy in advancing graph-structured data analysis. Prevailing LLM-based graph methods excel in adapting LLMs to text-rich graphs, wherein node attributes are text descriptions.…

Artificial Intelligence · Computer Science 2025-06-04 Dongzhe Fan , Yi Fang , Jiajin Liu , Djellel Difallah , Qiaoyu Tan

Accurately predicting drug-target interactions (DTIs) is pivotal for advancing drug discovery and target validation techniques. While machine learning approaches including those that are based on Graph Neural Networks (GNN) have achieved…

Machine Learning · Computer Science 2025-09-30 Yuehua Song , Yong Gao

Large language models (LLMs) have attracted significant attention for potential applications in digital health, while their application in mental health is subject to ongoing debate. This systematic review aims to evaluate the usage of LLMs…

Computers and Society · Computer Science 2024-08-14 Zhijun Guo , Alvina Lai , Johan Hilge Thygesen , Joseph Farrington , Thomas Keen , Kezhi Li

Eye-tracking data reveals valuable insights into users' cognitive states but is difficult to analyze due to its structured, non-linguistic nature. While large language models (LLMs) excel at reasoning over text, they struggle with temporal…

Human-Computer Interaction · Computer Science 2025-07-25 Dongyang Guo , Yasmeen Abdrabou , Enkeleda Thaqi , Enkelejda Kasneci

eXplainable artificial intelligence (XAI) methods have emerged to convert the black box of machine learning (ML) models into a more digestible form. These methods help to communicate how the model works with the aim of making ML models more…

While large language models (LLMs) present significant potential for supporting numerous real-world applications and delivering positive social impacts, they still face significant challenges in terms of the inherent risk of privacy…

Artificial Intelligence · Computer Science 2025-01-17 Huandong Wang , Wenjie Fu , Yingzhou Tang , Zhilong Chen , Yuxi Huang , Jinghua Piao , Chen Gao , Fengli Xu , Tao Jiang , Yong Li

Large Language Models (LLMs) reveal inherent and distinctive personas through dialogue. However, most existing persona discovery approaches rely on surface-level lexical or stylistic cues, treating dialogue as a flat sequence of tokens and…

Computation and Language · Computer Science 2026-04-28 Jisoo Yang , Jongwon Ryu , Minuk Ma , Trung X. Pham , Junyeong Kim

Large Language Models (LLMs) have recently demonstrated remarkable performance in tasks such as Retrieval-Augmented Generation (RAG) and autonomous AI agent workflows. Yet, when faced with large sets of unstructured documents requiring…

Databases · Computer Science 2025-02-25 Longbin Lai , Changwei Luo , Yunkai Lou , Mingchen Ju , Zhengyi Yang

As large language models (LLMs) are increasingly deployed in sensitive domains such as healthcare, law, and education, the demand for transparent, interpretable, and accountable AI systems becomes more urgent. Explainable AI (XAI) acts as a…

Computers and Society · Computer Science 2025-05-28 Francisco Herrera

Large language models are extensively applied across a wide range of tasks, such as customer support, content creation, educational tutoring, and providing financial guidance. However, a well-known drawback is their predisposition to…

Computation and Language · Computer Science 2024-07-08 Noa Nonkes , Sergei Agaronian , Evangelos Kanoulas , Roxana Petcu