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Large Language Models (LLMs) are rapidly reshaping scientific research. We analyze these changes in multiple, large-scale datasets with 2.1M preprints, 28K peer review reports, and 246M online accesses to scientific documents. We find: 1)…

Digital Libraries · Computer Science 2026-01-21 Keigo Kusumegi , Xinyu Yang , Paul Ginsparg , Mathijs de Vaan , Toby Stuart , Yian Yin

Literature analysis facilitates researchers to acquire a good understanding of the development of science and technology. The traditional literature analysis focuses largely on the literature metadata such as topics, authors, abstracts,…

Artificial Intelligence · Computer Science 2021-01-29 Linlin Hou , Ji Zhang , Ou Wu , Ting Yu , Zhen Wang , Zhao Li , Jianliang Gao , Yingchun Ye , Rujing Yao

Authoring data-driven articles is a complex process requiring authors to not only analyze data for insights but also craft a cohesive narrative that effectively communicates the insights. Text generation capabilities of contemporary large…

Human-Computer Interaction · Computer Science 2023-08-09 Nicole Sultanum , Arjun Srinivasan

Large Language Models (LLMs) are increasingly used to automate software development, yet most prior evaluations focus on functional correctness or high-level languages such as Python. As one of the first systematic explorations of…

Software Engineering · Computer Science 2025-09-04 Atieh Barati Nia , Mohammad Dindoost , David A. Bader

Large language models (LLMs) are increasingly applied to open-ended, interpretive annotation tasks, such as thematic analysis by researchers or generating feedback on student work by teachers. These tasks involve free-text annotations…

Computation and Language · Computer Science 2025-09-04 Hyunji Nam , Lucia Langlois , James Malamut , Mei Tan , Dorottya Demszky

We introduce an explainability method for biomedical hypothesis generation systems, built on top of the novel Hypothesis Generation Context Retriever framework. Our approach combines semantic graph-based retrieval and relevant…

Information Retrieval · Computer Science 2025-11-11 Ilya Tyagin , Saeideh Valipour , Aliaksandra Sikirzhytskaya , Michael Shtutman , Ilya Safro

Large Language Models (LLMs) have made remarkable strides in reasoning tasks, yet their performance often falters on novel and complex problems. Domain-specific continued pretraining (CPT) methods, such as those tailored for mathematical…

Artificial Intelligence · Computer Science 2025-07-24 Qifan Zhang , Nuo Chen , Zehua Li , Miao Peng , Jing Tang , Jia Li

Research ideation involves broad exploring and deep refining ideas. Both require deep engagement with literature. Existing tools focus primarily on idea broad generation, yet offer little support for iterative specification, refinement, and…

Human-Computer Interaction · Computer Science 2025-07-16 Kevin Pu , K. J. Kevin Feng , Tovi Grossman , Tom Hope , Bhavana Dalvi Mishra , Matt Latzke , Jonathan Bragg , Joseph Chee Chang , Pao Siangliulue

Reading comprehension is a fundamental skill in human cognitive development. With the advancement of Large Language Models (LLMs), there is a growing need to compare how humans and LLMs understand language across different contexts and…

Computation and Language · Computer Science 2025-07-17 Yuhong Zhang , Jialu Li , Shilai Yang , Yuchen Xu , Gert Cauwenberghs , Tzyy-Ping Jung

Innovation is a key driving force of human civilization. As the body of knowledge has grown considerably, bridging knowledge across different disciplines, where significant innovation often emerges, has become increasingly challenging. The…

Computation and Language · Computer Science 2026-05-07 Yuanhao Shen , Daniel Xavier de Sousa , Ricardo Marçal , Hongyu Guo , Xiaodan Zhu

Peer review is a critical process for ensuring the integrity of published scientific research. Confidence in this process is predicated on the assumption that experts in the relevant domain give careful consideration to the merits of…

Computation and Language · Computer Science 2024-12-09 Sungduk Yu , Man Luo , Avinash Madasu , Vasudev Lal , Phillip Howard

In recent years, efforts have been made to use text information for better user profiling and item characterization in recommendations. However, text information can sometimes be of low quality, hindering its effectiveness for real-world…

Artificial Intelligence · Computer Science 2024-02-15 Yingpeng Du , Ziyan Wang , Zhu Sun , Haoyan Chua , Hongzhi Liu , Zhonghai Wu , Yining Ma , Jie Zhang , Youchen Sun

Large Language Models (LLMs) often struggle with generating truly innovative ideas, typically defaulting to high-probability, familiar concepts within their training data's "gravity wells." While advanced search-based methods like Tree of…

Artificial Intelligence · Computer Science 2025-11-18 Lufan Chang

While many researchers use Large Language Models (LLMs) through chat-based access, their real potential lies in leveraging LLMs via application programming interfaces (APIs). This paper conceptualizes LLMs as universal text processing…

Computation and Language · Computer Science 2026-03-23 Ivan Zupic

Learning on Graphs has attracted immense attention due to its wide real-world applications. The most popular pipeline for learning on graphs with textual node attributes primarily relies on Graph Neural Networks (GNNs), and utilizes shallow…

Machine Learning · Computer Science 2024-01-17 Zhikai Chen , Haitao Mao , Hang Li , Wei Jin , Hongzhi Wen , Xiaochi Wei , Shuaiqiang Wang , Dawei Yin , Wenqi Fan , Hui Liu , Jiliang Tang

The present study proposes LitStoryTeller, an interactive system for visually exploring the semantic structure of a scientific article. We demonstrate how LitStoryTeller could be used to answer some of the most fundamental research…

Human-Computer Interaction · Computer Science 2017-09-13 Qing Ping , Chaomei Chen

Literature reviews are an essential component of scientific research, but they remain time-intensive and challenging to write, especially due to the recent influx of research papers. This paper explores the zero-shot abilities of recent…

Graph recommendation methods, representing a connected interaction perspective, reformulate user-item interactions as graphs to leverage graph structure and topology to recommend and have proved practical effectiveness at scale. Large…

Artificial Intelligence · Computer Science 2025-07-18 Xinyuan Wang , Liang Wu , Liangjie Hong , Hao Liu , Yanjie Fu

Graphs are a widely used paradigm for representing non-Euclidean data, with applications ranging from social network analysis to biomolecular prediction. While graph learning has achieved remarkable progress, real-world graph data presents…

Academic paper review typically requires substantial time, expertise, and human resources. Large Language Models (LLMs) present a promising method for automating the review process due to their extensive training data, broad knowledge base,…

Computers and Society · Computer Science 2025-06-24 Chuanlei Li , Xu Hu , Minghui Xu , Kun Li , Yue Zhang , Xiuzhen Cheng