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We present direct astrophysical N-body simulations with up to a few million bodies using our parallel MPI/CUDA code on large GPU clusters in China, Ukraine and Germany, with different kinds of GPU hardware. These clusters are directly…

Instrumentation and Methods for Astrophysics · Physics 2013-12-09 P. Berczik , R. Spurzem , L. Wang , S. Zhong , O. Veles , I. Zinchenko , S. Huang , M. Tsai , G. Kennedy , S. Li , L. Naso , C. Li

Vertex models represent confluent tissue by polygonal or polyhedral tilings of space, with the individual cell interacting via force laws that depend on both the geometry of the cells and the topology of the tessellation. This dependence on…

Biological Physics · Physics 2017-09-13 Daniel M. Sussman

Monte Carlo simulations play a crucial role in all stages of particle collider experiments. There has been a long-term trend in HEP of both increasing collision energies and the luminosity. As a result, the requirements for MC simulations…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-27 Felix Hoffmann , Udo Kebschull

(Abridged) We have developed a numerical software library for collisionless N-body simulations named "Phantom-GRAPE" which highly accelerates force calculations among particles by use of a new SIMD instruction set extension to the x86…

Instrumentation and Methods for Astrophysics · Physics 2015-06-04 Ataru Tanikawa , Kohji Yoshikawa , Keigo Nitadori , Takashi Okamoto

TensorCircuit is an open source quantum circuit simulator based on tensor network contraction, designed for speed, flexibility and code efficiency. Written purely in Python, and built on top of industry-standard machine learning frameworks,…

Python has become the de-facto language for training deep neural networks, coupling a large suite of scientific computing libraries with efficient libraries for tensor computation such as PyTorch or TensorFlow. However, when models are used…

Machine Learning · Computer Science 2021-04-02 Zachary DeVito , Jason Ansel , Will Constable , Michael Suo , Ailing Zhang , Kim Hazelwood

Computational models can provide significant insight into the operation mechanisms and deficiencies of photovoltaic solar cells. Solcore is a modular set of computational tools, written in Python 3, for the design and simulation of…

Applied Physics · Physics 2018-04-17 D. Alonso-Álvarez , T. Wilson , P. Pearce , M. Führer , D. Farrell , N. Ekins-Daukes

We introduce CORTEX, an algorithmic framework designed for large-scale brain simulation. Leveraging the computational capacity of the Fugaku Supercomputer, CORTEX maximizes available problem size and processing performance. Our primary…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-07 Tianxiang Lyu , Mitsuhisa Sato , Shigeki Aoki , Ryutaro Himeno , Zhe Sun

Iterative memory-bound solvers commonly occur in HPC codes. Typical GPU implementations have a loop on the host side that invokes the GPU kernel as much as time/algorithm steps there are. The termination of each kernel implicitly acts the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-15 Lingqi Zhang , Mohamed Wahib , Peng Chen , Jintao Meng , Xiao Wang , Toshio Endo , Satoshi Matsuoka

On the basis of ab initio quantum mechanics (QM) calculation, the obtained electron heat capacity is implemented into energy equation of electron subsystem in two temperature model (TTM). Upon laser irradiation on the copper film, energy…

Chemical Physics · Physics 2016-03-01 Pengfei Ji , Yuwen Zhang

The race towards performance increase and computing power has led to chips with heterogeneous and complex designs, integrating an ever-growing number of cores on the same monolithic chip or chiplet silicon die. Higher integration density,…

Systems and Control · Electrical Eng. & Systems 2024-05-29 Giovanni Bambini , Alessandro Ottaviano , Christian Conficoni , Andrea Tilli , Luca Benini , Andrea Bartolini

A finite-difference Micromagnetic simulation code written in MATLAB is presented with Graphics Processing Unit (GPU) acceleration. The high performance of Graphics Processing Unit (GPU) is demonstrated compared to a typical Central…

Computational Engineering, Finance, and Science · Computer Science 2015-01-30 Ru Zhu

Modeling the whole cardiac function involves the solution of several complex multi-physics and multi-scale models that are highly computationally demanding, which call for simpler yet accurate, high-performance computational tools. Despite…

Mathematical Software · Computer Science 2022-10-10 Pasquale C. Africa , Roberto Piersanti , Marco Fedele , Luca Dede' , Alfio Quarteroni

The dynamics of energetic particle (EP) species, born from fusion reactions or plasma heating schemes, are critical for predicting the behavior of magnetic confinement fusion experiments and future fusion reactors. Because energetic…

Computational fluid dynamics (CFD) is an important tool for the simulation of the cardiovascular function and dysfunction. Due to the complexity of the anatomy, the transitional regime of blood flow in the heart, and the strong mutual…

In the wake of the intense effort made for the experimental CILEX project, numerical simulation cam- paigns have been carried out in order to finalize the design of the facility and to identify optimal laser and plasma parameters. These…

Computational Physics · Physics 2016-04-20 Arnaud Beck , Jacob Trier Frederiksen , Julien Dérouillat

In today's technology-driven world, early-stage software development and testing are crucial. Virtual Platforms (VPs) have become indispensable tools for this purpose as they serve as a platform to execute and debug the unmodified target…

Software Engineering · Computer Science 2025-05-22 Nils Bosbach , Rebecca Pelke , Niko Zurstraßen , Jan Henrik Weinstock , Lukas Jünger , Rainer Leupers

Earth system models (ESM) demand significant hardware resources and energy consumption to solve atmospheric chemistry processes. Recent studies have shown improved performance from running these models on GPU accelerators. Nonetheless,…

Endovascular aneurysm repair (EVAR) is a current alternative treatment for thoracic and abdominal aortic aneurysms, but is still sometimes compromised by possible complications such as device migration or endoleaks. In order to assist…

Medical Physics · Physics 2019-02-05 V. Acosta Santamaría , G. Daniel , D. Perrin , J. Albertini , E. Rosset , S. Avril

We present a case-study on the utility of graphics cards to perform massively parallel simulation of advanced Monte Carlo methods. Graphics cards, containing multiple Graphics Processing Units (GPUs), are self-contained parallel…

Computation · Statistics 2015-05-05 Anthony Lee , Christopher Yau , Michael B. Giles , Arnaud Doucet , Christopher C. Holmes
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