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Despite advances in deep probabilistic models, learning discrete latent representations remains challenging. This work introduces a novel method to improve inference in discrete Variational Autoencoders by reframing the inference problem…

Machine Learning · Computer Science 2025-06-11 María Martínez-García , Grace Villacrés , David Mitchell , Pablo M. Olmos

In recent years, deep generative models have been successfully adopted for various molecular design tasks, particularly in the life and material sciences. A critical challenge for pre-trained generative molecular design (GMD) models is to…

Machine Learning · Computer Science 2024-06-03 A N M Nafiz Abeer , Sanket Jantre , Nathan M Urban , Byung-Jun Yoon

Learning low-dimensional representations of single-cell transcriptomics has become instrumental to its downstream analysis. The state of the art is currently represented by neural network models such as variational autoencoders (VAEs) which…

Machine Learning · Computer Science 2024-02-01 Viktoria Schuster , Anders Krogh

Variational autoencoders (VAEs) are powerful deep generative models widely used to represent high-dimensional complex data through a low-dimensional latent space learned in an unsupervised manner. In the original VAE model, the input data…

Machine Learning · Computer Science 2022-07-05 Laurent Girin , Simon Leglaive , Xiaoyu Bie , Julien Diard , Thomas Hueber , Xavier Alameda-Pineda

Given the notably increasing complexity of mathematical models to study realistic systems and their coupling to their environment that constrains their dynamics, both analytical approaches and numerical methods that build on these models,…

Quantum Physics · Physics 2019-11-11 I. Luchnikov , A. Ryzhov , P. -J. C. Stas , S. N. Filippov , H. Ouerdane

This paper introduces a new interpretation of the Variational Autoencoder framework by taking a fully geometric point of view. We argue that vanilla VAE models unveil naturally a Riemannian structure in their latent space and that taking…

Machine Learning · Statistics 2022-11-04 Clément Chadebec , Stéphanie Allassonnière

We propose a novel deep clustering method that integrates Variational Autoencoders (VAEs) into the Expectation-Maximization (EM) framework. Our approach models the probability distribution of each cluster with a VAE and alternates between…

Machine Learning · Computer Science 2025-01-14 Michael Adipoetra , Ségolène Martin

Many real-world problems require reasoning across multiple scales, demanding models which operate not on single data points, but on entire distributions. We introduce generative distribution embeddings (GDE), a framework that lifts…

Machine Learning · Computer Science 2026-02-23 Nic Fishman , Gokul Gowri , Peng Yin , Jonathan Gootenberg , Omar Abudayyeh

In this paper we study generative modeling via autoencoders while using the elegant geometric properties of the optimal transport (OT) problem and the Wasserstein distances. We introduce Sliced-Wasserstein Autoencoders (SWAE), which are…

Machine Learning · Computer Science 2018-06-28 Soheil Kolouri , Phillip E. Pope , Charles E. Martin , Gustavo K. Rohde

Thorough analysis of local droplet-level interactions is crucial to better understand the microphysical processes in clouds and their effect on the global climate. High-accuracy simulations of relevant droplet size distributions from Large…

Forecasting short-term motion of nearby vehicles presents an inherently challenging issue as the space of their possible future movements is not strictly limited to a set of single trajectories. Recently proposed techniques that demonstrate…

Artificial Intelligence · Computer Science 2021-03-09 Albert Dulian , John C. Murray

Aerosols sourced from combustion such as black carbon (BC) are important short-lived climate forcers whose direct radiative forcing and atmospheric lifetime depend on their morphology. These aerosols' complex morphology makes modeling their…

Atmospheric and Oceanic Physics · Physics 2021-07-22 Kara D. Lamb , Pierre Gentine

Variational autoencoders (VAEs) are a popular generative model used to approximate distributions. The encoder part of the VAE is used in amortized learning of latent variables, producing a latent representation for data samples. Recently,…

Machine Learning · Statistics 2023-05-12 Daniel G. Edelberg , Roy R. Lederman

In data-driven drug discovery, designing molecular descriptors is a very important task. Deep generative models such as variational autoencoders (VAEs) offer a potential solution by designing descriptors as probabilistic latent vectors…

Machine Learning · Computer Science 2023-08-23 Daiki Koge , Naoaki Ono , Shigehiko Kanaya

Advancements in optical quantum technologies have been enabled by the generation, manipulation, and characterization of light, with identification based on its photon statistics. However, characterizing light and its sources through single…

Quantum Physics · Physics 2024-05-09 Mahesh Bhupati , Abhishek Mall , Anshuman Kumar , Pankaj K. Jha

Popular generative model learning methods such as Generative Adversarial Networks (GANs), and Variational Autoencoders (VAE) enforce the latent representation to follow simple distributions such as isotropic Gaussian. In this paper, we…

Machine Learning · Computer Science 2018-03-15 Cem Subakan , Oluwasanmi Koyejo , Paris Smaragdis

As deep neural networks become more adept at traditional tasks, many of the most exciting new challenges concern multimodality---observations that combine diverse types, such as image and text. In this paper, we introduce a family of…

Machine Learning · Computer Science 2019-12-12 Mike Wu , Noah Goodman

Variational Autoencoder (VAE) aims to compress pixel data into low-dimensional latent space, playing an important role in OpenAI's Sora and other latent video diffusion generation models. While most of existing video VAEs inflate a…

Computer Vision and Pattern Recognition · Computer Science 2024-11-12 Pingyu Wu , Kai Zhu , Yu Liu , Liming Zhao , Wei Zhai , Yang Cao , Zheng-Jun Zha

Learning interpretable representations of data remains a central challenge in deep learning. When training a deep generative model, the observed data are often associated with certain categorical labels, and, in parallel with learning to…

Machine Learning · Computer Science 2019-10-01 Yifan Xue , Michael Ding , Xinghua Lu

Masked autoencoding has become a successful pretraining paradigm for Transformer models for text, images, and, recently, point clouds. Raw automotive datasets are suitable candidates for self-supervised pre-training as they generally are…

Computer Vision and Pattern Recognition · Computer Science 2023-03-10 Georg Hess , Johan Jaxing , Elias Svensson , David Hagerman , Christoffer Petersson , Lennart Svensson