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We introduce a simple physical picture to explain the process of molecular sorting, whereby specific proteins are concentrated and distilled into submicrometric lipid vesicles in eukaryotic cells. To this purpose, we formulate a model based…

In this paper, a simple memory limited transmitter for molecular communication is proposed, in which information is encoded in the diffusion rate of the molecules. Taking advantage of memory, the proposed transmitter reduces the ISI problem…

Information Theory · Computer Science 2014-10-30 Mohammad Movahednasab , Mehdi Soleimanifar , Amin Gohari , Masoumeh Nasiri Kenari , Urbashi Mitra

Transport of solid particles in blood flow exhibits qualitative differences in the transport mechanism when the particle varies from nanoscale to microscale size comparable to the red blood cell (RBC). The effect of microscale particle…

Soft Condensed Matter · Physics 2019-10-15 Zixiang Liu , Jonathan R. Clausen , Rekha R. Rao , Cyrus K. Aidun

Ray tracing (RT) has emerged as a key tool for propagation channel modeling and network planning. Conventional RT is based on electromagnetic (EM) wave theory and its application relies on detailed mesh-based environment representations and…

Signal Processing · Electrical Eng. & Systems 2026-05-13 Zhuoyin Li , Ruisi He , Mi Yang , Ziyi Qi , Zhengyu Zhang , Jiahui Han , Haoxiang Zhang , Bingcheng Liu

A pore network modeling (PNM) framework for the simulation of transport of charged species, such as ions, in porous media is presented. It includes the Nernst-Planck (NP) equations for each charged species in the electrolytic solution in…

Computational Physics · Physics 2020-05-20 Mehrez Agnaou , Mohammad Amin Sadeghi , Thomas George Tranter , Jeff Gostick

Emulsions often act as carriers for water-insoluble solutes that are delivered to a specific target. The molecular transport of solutes in emulsions can be facilitated by surfactants and is often limited by diffusion through the continuous…

Electromigrated nanoscale junctions have proven very useful for studying electronic transport at the single-molecule scale. However, confirming that conduction is through precisely the molecule of interest and not some contaminant or metal…

Mesoscale and Nanoscale Physics · Physics 2008-09-04 D. R. Ward , G. D. Scott , Z. K. Keane , N. J. Halas , D. Natelson

Proton-coupled electron transfer (PCET) is the underlying mechanism governing important reactions ranging from water splitting in photosynthesis to oxygen reduction in hydrogen fuel cells. The interplay of proton and electronic charge…

Chemical Physics · Physics 2023-09-12 Micheline B. Soley , Pablo E. Videla , Erik T. J. Nibbering , Victor S. Batista

Most of the intra-cellular events involved in the initiation and propagation phases of this process has now been identified astrocytes. The control of the spread of intracellular calcium signaling has been demonstrated to occur at several…

Cell Behavior · Quantitative Biology 2013-01-08 Brajesh Kumar Jha , Neeru Adlakha , M. N. Mehta

Despite empirical successes of recurrent neural networks (RNNs) in natural language processing (NLP), theoretical understanding of RNNs is still limited due to intrinsically complex non-linear computations. We systematically analyze RNNs'…

Disordered Systems and Neural Networks · Physics 2022-05-19 Jirawat Tangpanitanon , Chanatip Mangkang , Pradeep Bhadola , Yuichiro Minato , Dimitris G. Angelakis , Thiparat Chotibut

The rapid progress in 6G communication and high-bandwidth radar has driven an unprecedented surge in the spatial density of signal sources, resulting in an increasingly congested electromagnetic (EM) environment. When resolving closely…

Applied Physics · Physics 2026-05-20 Sheng Gao , Songtao Yang , Haiou Zhang , Yuan Shen , Xing Lin

A model for the motion of ring-shaped DNA in a gel is introduced and studied by numerical simulations and a mean-field approximation. The ring motion is mediated by finger-shaped loops (hernias) that move in an amoeba-like fashion around…

Soft Condensed Matter · Physics 2009-10-30 Uri Alon , David Mukamel

We have combined transmission speckle photography and machine learning for direct classification and recognition of milk fat content classes. Our aim was hinged on the fact that parameters of scattering particles (and the dispersion medium)…

Computer Vision and Pattern Recognition · Computer Science 2023-07-31 Kwasi Nyandey , Daniel Jakubczyk

Proteins are complex biomolecules that perform a variety of crucial functions within living organisms. Designing and generating novel proteins can pave the way for many future synthetic biology applications, including drug discovery.…

Current MRI super-resolution (SR) methods only use existing contrasts acquired from typical clinical sequences as input for the neural network (NN). In turbo spin echo sequences (TSE) the sequence parameters can have a strong influence on…

Medical Physics · Physics 2023-05-15 Hoai Nam Dang , Vladimir Golkov , Thomas Wimmer , Daniel Cremers , Andreas Maier , Moritz Zaiss

Finite Element Modeling (FEM) has been widely used to model the electric field distribution, to study the interaction between stimulation electrodes and neural tissue. However, due to the insufficient computational capability to represent…

Neurons and Cognition · Quantitative Biology 2019-08-22 Jiahui Wang , Hao Wanga , Xin Yuan Thow , Nitish V. Thakor

The current state of the art in structural biology is led by NMR, X-ray crystallography and TEM investigations. These powerful tools however all rely on averaging over a large ensemble of molecules. Here, we present an alternative concept…

Atomic and Molecular Clusters · Physics 2015-12-15 Tatiana Latychevskaia , Jean-Nicolas Longchamp , Conrad Escher , Hans-Werner Fink

Piezoionic hydrogels offer a route to mechanically driven bioelectronic interfaces, but their output is limited by rapid, symmetric ion redistribution that dissipates charge gradients. In biological electrocytes, efficient signal generation…

Mesoscale and Nanoscale Physics · Physics 2026-05-01 Tofayel Ahammad Ovee , Daniel Kroeger , Jean-François Louf

Molecular Communication (MC) is an important nanoscale communication paradigm, which is employed for the interconnection of the nanomachines (NMs) to form nanonetworks. A transmitter NM (TN) sends the information symbols by emitting…

Signal Processing · Electrical Eng. & Systems 2020-03-27 Baris Atakan , Fatih Gulec

Intracellular phagosomes have a lipid bilayer encapsulated fluidic shell outside the particle, on the outer side of which, molecular motors are attached. An optically trapped spherical birefringent particle phagosome provides an ideal…

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