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3D models are commonly used in computer vision and graphics. With the wider availability of mesh data, an efficient and intrinsic deep learning approach to processing 3D meshes is in great need. Unlike images, 3D meshes have irregular…

Graphics · Computer Science 2019-11-01 Yi-Ling Qiao , Lin Gao , Jie Yang , Paul L. Rosin , Yu-Kun Lai , Xilin Chen

Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength of adhesion of one cell type to itself relative to other…

Quantitative Methods · Quantitative Biology 2023-08-02 Dhananjay Bhaskar , William Y. Zhang , Alexandria Volkening , Björn Sandstede , Ian Y. Wong

This work explores the large-scale multi-agent communication mechanism under a multi-agent reinforcement learning (MARL) setting. We summarize the general categories of topology for communication structures in MARL literature, which are…

Machine Learning · Computer Science 2020-02-12 Junjie Sheng , Xiangfeng Wang , Bo Jin , Junchi Yan , Wenhao Li , Tsung-Hui Chang , Jun Wang , Hongyuan Zha

We propose an adaptive control protocol for identifying the topology of dynamical networks interconnected over undirected graphs with cooperative and antagonistic interactions. The signed network is modeled using a repelling Laplacian.…

Systems and Control · Electrical Eng. & Systems 2026-04-13 Pelin Sekercioglu , Nana Wang , Angela Fontan , Dimos V. Dimarogonas

Multiplex networks are complex graph structures in which a set of entities are connected to each other via multiple types of relations, each relation representing a distinct layer. Such graphs are used to investigate many complex…

Latent Graph Inference (LGI) relaxed the reliance of Graph Neural Networks (GNNs) on a given graph topology by dynamically learning it. However, most of LGI methods assume to have a (noisy, incomplete, improvable, ...) input graph to rewire…

Machine Learning · Computer Science 2023-08-04 Claudio Battiloro , Indro Spinelli , Lev Telyatnikov , Michael Bronstein , Simone Scardapane , Paolo Di Lorenzo

Multicellular coordination relies on broadcast-addressable receptors, yet engineered magnetic systems face an addressability bottleneck because global fields intrinsically conflate power and control. Here, we introduce MagCeptors to resolve…

Systems and Control · Electrical Eng. & Systems 2026-05-20 Sishen Yuan , Baijia Liang , Tangyou Liu , Yiqing Huang , Haoxuan Wu , Shuo Xu , Hongliang Ren

Within the context of topological data analysis, the problems of identifying topological significance and matching signals across datasets are important and useful inferential tasks in many applications. The limitation of existing solutions…

Algebraic Topology · Mathematics 2024-06-26 Inés García-Redondo , Anthea Monod , Anna Song

Networks are important structures used to model complex systems where interactions take place. In a basic network model, entities are represented as nodes, and interaction and relations among them are represented as edges. However, in a…

Social and Information Networks · Computer Science 2021-02-18 Mehmet Emin Aktas , Esra Akbas

Recent work in graph neural networks (GNNs) has led to improvements in molecular activity and property prediction tasks. Unfortunately, GNNs often fail to capture the relative importance of interactions between molecular substructures, in…

Machine Learning · Computer Science 2020-04-03 Emmanuel Noutahi , Dominique Beaini , Julien Horwood , Sébastien Giguère , Prudencio Tossou

Coupled map lattices (CMLs) are prototypical dynamical systems on networks/graphs. They exhibit complex patterns generated via the interplay of diffusive/Laplacian coupling and nonlinear reactions modelled by a single iterated map at each…

Chaotic Dynamics · Physics 2021-09-24 Tobias Böhle , Christian Kuehn , Raffaella Mulas , Jürgen Jost

Topological Machine Learning (TML) is an emerging field that leverages techniques from algebraic topology to analyze complex data structures in ways that traditional machine learning methods may not capture. This tutorial provides a…

Machine Learning · Computer Science 2024-09-05 Baris Coskunuzer , Cüneyt Gürcan Akçora

Cross-layer resource allocation over mobile edge computing (MEC)-aided cell-free networks can sufficiently exploit the transmitting and computing resources to promote the data rate. However, the technical bottlenecks of traditional methods…

Machine Learning · Computer Science 2024-12-24 Chong Zheng , Shiwen He , Yongming Huang , Tony Q. S. Quek

Large language model (LLM)-based multi-agent systems have shown strong potential for complex reasoning by coordinating specialized agents through structured communication. However, existing topology-evolution methods typically construct or…

Computation and Language · Computer Science 2026-05-19 Taolin Zhang , Zijie Zhou , Jiuheng Wan , Tingyuan Hu , Chengyu Wang , Xiaofeng He , Richang Hong

Topological signals, i.e., dynamical variables defined on nodes, links, triangles, etc. of higher-order networks, are attracting increasing attention. However the investigation of their collective phenomena is only at its infancy. Here we…

Statistical Mechanics · Physics 2023-05-17 Timoteo Carletti , Lorenzo Giambagli , Ginestra Bianconi

Intracellular networks process cellular-level information and control cell fate. They can be computationally modeled using Boolean networks, which are implicit-time causal models of discrete binary events. These networks can be embedded in…

Molecular Networks · Quantitative Biology 2025-01-28 John Metzcar , Katie Pletz , Heber L. Rocha , Jordan C Rozum

The closed loops or cycles in a brain network embeds higher order signal transmission paths, which provide fundamental insights into the functioning of the brain. In this work, we propose an efficient algorithm for systematic identification…

Neurons and Cognition · Quantitative Biology 2023-01-04 D. Vijay Anand , Moo K. Chung

The efficient implementation of collective communiction operations has received much attention. Initial efforts produced "optimal" trees based on network communication models that assumed equal point-to-point latencies between any two…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 N. T. Karonis , B. de Supinski , I. Foster , W. Gropp , E. Lusk

Neural manifolds summarize the intrinsic structure of the information encoded by a population of neurons. Advances in experimental techniques have made simultaneous recordings from multiple brain regions increasingly commonplace, raising…

Neurons and Cognition · Quantitative Biology 2025-03-27 Iris H. R. Yoon , Gregory Henselman-Petrusek , Yiyi Yu , Robert Ghrist , Spencer LaVere Smith , Chad Giusti

In this paper we present a decentralized algorithm to estimate the eigenvalues of the Laplacian matrix that encodes the network topology of a multi-agent system. We consider network topologies modeled by undirected graphs. The basic idea is…

Systems and Control · Computer Science 2012-06-21 Mauro Franceschelli , Andrea Gasparri , Alessandro Giua , Carla Seatzu
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