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In today's world of big data, computational analysis has become a key driver of biomedical research. Recent exponential growth in the volume of available omics data has reshaped the landscape of contemporary biology, creating demand for a…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-12-09 Jaqueline J. Brito , Thiago Mosqueiro , Jeremy Rotman , Victor Xue , Douglas J. Chapski , Juan De la Hoz , Paulo Matias , Lana Martin , Alex Zelikovsky , Matteo Pellegrinni , Serghei Mangul

3D semantic scene graphs (3DSSG) provide compact structured representations of environments by explicitly modeling objects, attributes, and relationships. While 3DSSGs have shown promise in robotics and embodied AI, many existing methods…

Computer Vision and Pattern Recognition · Computer Science 2025-09-16 Marian Renz , Felix Igelbrink , Martin Atzmueller

The demand for semantically rich 3D models of indoor scenes is rapidly growing, driven by applications in augmented reality, virtual reality, and robotics. However, creating them from sparse views remains a challenge due to geometric…

Computer Vision and Pattern Recognition · Computer Science 2025-10-10 Yijie Gao , Houqiang Zhong , Tianchi Zhu , Zhengxue Cheng , Qiang Hu , Li Song

RGB-Thermal (RGBT) tracking aims to achieve robust object localization across diverse environmental conditions by fusing visible and thermal infrared modalities. However, existing RGBT trackers rely solely on initial-frame visual…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Hao Li , Yuhao Wang , Wenning Hao , Pingping Zhang , Dong Wang , Huchuan Lu

Retrieval-Augmented Generation (RAG) is an advanced technique designed to address the challenges of Artificial Intelligence-Generated Content (AIGC). By integrating context retrieval into content generation, RAG provides reliable and…

The study of ancient writings has great value for archaeology and philology. Essential forms of material are photographic characters, but manual photographic character recognition is extremely time-consuming and expertise-dependent.…

Computer Vision and Pattern Recognition · Computer Science 2023-03-14 Hongxiang Huang , Daihui Yang , Gang Dai , Zhen Han , Yuyi Wang , Kin-Man Lam , Fan Yang , Shuangping Huang , Yongge Liu , Mengchao He

Circular genome visualizations are essential for exploring structural variants and gene regulation. However, existing tools often require complex scripting and manual configuration, making the process time-consuming, error-prone, and…

Genomics · Quantitative Biology 2025-07-08 Chi Zhang , Yu Dong , Yang Wang , Yuetong Han , Guihua Shan , Bixia Tang

Generative Retrieval (GR) is an emerging paradigm in information retrieval that leverages generative models to directly map queries to relevant document identifiers (DocIDs) without the need for traditional query processing or document…

Information Retrieval · Computer Science 2024-06-05 Tzu-Lin Kuo , Tzu-Wei Chiu , Tzung-Sheng Lin , Sheng-Yang Wu , Chao-Wei Huang , Yun-Nung Chen

We present \textbf{SymbioticRAG}, a novel framework that fundamentally reimagines Retrieval-Augmented Generation~(RAG) systems by establishing a bidirectional learning relationship between humans and machines. Our approach addresses two…

Information Retrieval · Computer Science 2025-05-06 Qiang Sun , Tingting Bi , Sirui Li , Eun-Jung Holden , Paul Duuring , Kai Niu , Wei Liu

Retrieval-augmented generation (RAG) and its graph-based extensions (GraphRAG) are effective paradigms for improving large language model (LLM) reasoning by grounding generation in external knowledge. However, most existing RAG and GraphRAG…

Information Retrieval · Computer Science 2026-04-14 Dongzhe Fan , Zheyi Xue , Siyuan Liu , Qiaoyu Tan

The earth texture with complex morphological geometry and compositions such as shale and carbonate rocks, is typically characterized with sparse field samples because of an expensive and time-consuming characterization process. Accordingly,…

Computer Vision and Pattern Recognition · Computer Science 2021-09-15 Sung Eun Kim , Hongkyu Yoon , Jonghyun Lee

The genetic structure of human populations is extraordinarily complex and of fundamental importance to studies of anthropology, evolution, and medicine. As increasingly many individuals are of mixed origin, there is an unmet need for tools…

The fragmentation between high-level task semantics and low-level geometric features remains a persistent challenge in robotic manipulation. While vision-language models (VLMs) have shown promise in generating affordance-aware visual…

Computer Vision and Pattern Recognition · Computer Science 2025-08-11 Zhihao Zhu , Yifan Zheng , Siyu Pan , Yaohui Jin , Yao Mu

In real-world applications, spectral Graph Neural Networks (GNNs) are powerful tools for processing diverse types of graphs. However, a single GNN often struggles to handle different graph types-such as homogeneous and heterogeneous…

Machine Learning · Computer Science 2024-12-19 Shibing Mo , Kai Wu , Qixuan Gao , Xiangyi Teng , Jing Liu

Open-vocabulary Scene Graph Generation (OV-SGG) overcomes the limitations of the closed-set assumption by aligning visual relationship representations with open-vocabulary textual representations. This enables the identification of novel…

Computer Vision and Pattern Recognition · Computer Science 2025-07-15 Tao Liu , Rongjie Li , Chongyu Wang , Xuming He

Retrieval Augmented Generation (RAG) has emerged as a standard paradigm for enhancing the factual accuracy and contextual relevance of Large Language Models (LLMs) by integrating retrieval mechanisms. However, existing evaluation frameworks…

Computation and Language · Computer Science 2025-04-11 Mattia Rengo , Senad Beadini , Domenico Alfano , Roberto Abbruzzese

Graph-based retrieval-augmented generation (RAG) enriches large language models (LLMs) with external knowledge for long-context understanding and multi-hop reasoning, but existing methods face a granularity dilemma: fine-grained…

Computation and Language · Computer Science 2025-09-26 Yaxiong Wu , Jianyuan Bo , Yongyue Zhang , Sheng Liang , Yong Liu

We propose R3GS, a robust reconstruction and relocalization framework tailored for unconstrained datasets. Our method uses a hybrid representation during training. Each anchor combines a global feature from a convolutional neural network…

Computer Vision and Pattern Recognition · Computer Science 2025-05-22 Xu yan , Zhaohui Wang , Rong Wei , Jingbo Yu , Dong Li , Xiangde Liu

Millions of people in African countries face barriers to accessing healthcare due to language and literacy gaps. This research tackles this challenge by transforming complex medical documents -- in this case, prosthetic device user manuals…

Dynamic Scene Graphs (DSGs) provide a structured representation of hierarchical, interconnected environments, but current approaches struggle to capture stochastic dynamics, partial observability, and multi-agent activity. These aspects are…

Robotics · Computer Science 2025-10-13 Lars Ohnemus , Nils Hantke , Max Weißer , Kai Furmans