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Medical segmentation plays an important role in clinical applications like radiation therapy and surgical guidance, but acquiring clinically acceptable results is difficult. In recent years, progress has been witnessed with the success of…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Xin Zhang , Dongdong Meng , Sheng Li

Transformer models have achieved state-of-the-art results across a diverse range of domains. However, concern over the cost of training the attention mechanism to learn complex dependencies between distant inputs continues to grow. In…

Transformer-based deep learning models have shown promise for disease risk prediction using electronic health records(EHRs), but modeling temporal dependencies remains a key challenge due to irregular visit intervals and lack of uniform…

Machine Learning · Computer Science 2025-11-10 Daniel S. Lee , Mayra S. Haedo-Cruz , Chen Jiang , Oshin Miranda , LiRong Wang

Identifying robust and accurate correspondences across images is a fundamental problem in computer vision that enables various downstream tasks. Recent semi-dense matching methods emphasize the effectiveness of fusing relevant cross-view…

Computer Vision and Pattern Recognition · Computer Science 2024-05-24 Hongkai Chen , Zixin Luo , Yurun Tian , Xuyang Bai , Ziyu Wang , Lei Zhou , Mingmin Zhen , Tian Fang , David McKinnon , Yanghai Tsin , Long Quan

Transformer architecture has shown impressive performance in multiple research domains and has become the backbone of many neural network models. However, there is limited understanding on how it works. In particular, with a simple…

Computation and Language · Computer Science 2023-10-31 Yuandong Tian , Yiping Wang , Beidi Chen , Simon Du

Nanobodies (Nb) are monomeric heavy-chain fragments derived from heavy-chain only antibodies naturally found in Camelids and Sharks. Their considerably small size (~3-4 nm; 13 kDa) and favorable biophysical properties make them attractive…

Identifying T-cell receptors (TCRs) that interact with antigenic peptides provides the technical basis for developing vaccines and immunotherapies. The emergent deep learning methods excel at learning antigen binding patterns from known…

Quantitative Methods · Quantitative Biology 2024-11-28 Jiangbin Zheng , Qianhui Xu , Ruichen Xia , Stan Z. Li

Absolute camera pose regressors estimate the position and orientation of a camera given the captured image alone. Typically, a convolutional backbone with a multi-layer perceptron (MLP) head is trained using images and pose labels to embed…

Computer Vision and Pattern Recognition · Computer Science 2023-08-24 Yoli Shavit , Ron Ferens , Yosi Keller

We propose a novel attention gate (AG) model for medical imaging that automatically learns to focus on target structures of varying shapes and sizes. Models trained with AGs implicitly learn to suppress irrelevant regions in an input image…

Accurate and robust prediction of patient's response to drug treatments is critical for developing precision medicine. However, it is often difficult to obtain a sufficient amount of coherent drug response data from patients directly for…

Machine Learning · Computer Science 2021-02-02 Di He , Lei Xie

Accurate molecular property prediction (MPP) is a critical step in modern drug development. However, the scarcity of experimental validation data poses a significant challenge to AI-driven research paradigms. Under few-shot learning…

Machine Learning · Computer Science 2025-05-20 Yifan Dai , Xuanbai Ren , Tengfei Ma , Qipeng Yan , Yiping Liu , Yuansheng Liu , Xiangxiang Zeng

Graph neural networks frequently encounter significant performance degradation when confronted with structural noise or non-homophilous topologies. To address these systemic vulnerabilities, we present AdvSynGNN, a comprehensive…

Machine Learning · Computer Science 2026-04-14 Rong Fu , Muge Qi , Chunlei Meng , Shuo Yin , Kun Liu , Zhaolu Kang , Simon Fong

We present a mask-piloted Transformer which improves masked-attention in Mask2Former for image segmentation. The improvement is based on our observation that Mask2Former suffers from inconsistent mask predictions between consecutive decoder…

Computer Vision and Pattern Recognition · Computer Science 2023-03-16 Hao Zhang , Feng Li , Huaizhe Xu , Shijia Huang , Shilong Liu , Lionel M. Ni , Lei Zhang

Latent fingerprint identification remains a challenging task due to low image quality, background noise, and partial impressions. In this work, we propose a novel identification approach called LatentPrintFormer. The proposed model…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Arnab Maity , Manasa , Pavan Kumar C , Raghavendra Ramachandra

Empirical scoring functions based on either molecular force fields or cheminformatics descriptors are widely used, in conjunction with molecular docking, during the early stages of drug discovery to predict potency and binding affinity of a…

Machine Learning · Computer Science 2017-03-31 Joseph Gomes , Bharath Ramsundar , Evan N. Feinberg , Vijay S. Pande

Vehicular platooning promises transformative improvements in transportation efficiency and safety through the coordination of multi-vehicle formations enabled by Vehicle-to-Everything (V2X) communication. However, the distributed nature of…

Cryptography and Security · Computer Science 2025-12-24 Konstantinos Kalogiannis , Ahmed Mohamed Hussain , Hexu Li , Panos Papadimitratos

Patient-independent detection of epileptic activities based on visual spectral representation of continuous EEG (cEEG) has been widely used for diagnosing epilepsy. However, precise detection remains a considerable challenge due to subtle…

Signal Processing · Electrical Eng. & Systems 2023-05-01 Ruizhe Zheng , Jun Li , Yi Wang , Tian Luo , Yuguo Yu

Transformer is a ubiquitous model for natural language processing and has attracted wide attentions in computer vision. The attention maps are indispensable for a transformer model to encode the dependencies among input tokens. However,…

Machine Learning · Computer Science 2021-02-26 Yujing Wang , Yaming Yang , Jiangang Bai , Mingliang Zhang , Jing Bai , Jing Yu , Ce Zhang , Gao Huang , Yunhai Tong

Local feature matching between images remains a challenging task, especially in the presence of significant appearance variations, e.g., extreme viewpoint changes. In this work, we propose DeepMatcher, a deep Transformer-based network built…

Computer Vision and Pattern Recognition · Computer Science 2023-01-10 Tao Xie , Kun Dai , Ke Wang , Ruifeng Li , Lijun Zhao

Transformers are state-of-the-art networks for most sequence processing tasks. However, the self-attention mechanism often used in Transformers requires large time windows for each computation step and thus makes them less suitable for…

Neural and Evolutionary Computing · Computer Science 2023-03-22 Nathan Leroux , Jan Finkbeiner , Emre Neftci