Related papers: Computing k-mers in Graphs

For a positive integer $k$, a $k$-colouring of a graph $G=(V,E)$ is a mapping $c: V\rightarrow\{1,2,...,k\}$ such that $c(u)\neq c(v)$ whenever $uv\in E$. The Colouring problem is to decide, for a given $G$ and $k$, whether a $k$-colouring…

We study the problem of online graph coloring for $k$-colorable graphs. The best previously known deterministic algorithm uses $\widetilde{O}(n^{1-\frac{1}{k!}})$ colors for general $k$ and $\widetilde{O}(n^{5/6})$ colors for $k = 4$, both…

A $k$-colouring of a graph $G$ is an assignment of at most $k$ colours to the vertices of $G$ so that adjacent vertices are assigned different colours. The reconfiguration graph of the $k$-colourings, $\mathcal{R}_k(G)$, is the graph whose…

The \emph{maximal $k$-edge-connected subgraphs} problem is a classical graph clustering problem studied since the 70's. Surprisingly, no non-trivial technique for this problem in weighted graphs is known: a very straightforward…

Finding dense subgraphs is a core problem in graph mining with many applications in diverse domains. At the same time many real-world networks vary over time, that is, the dataset can be represented as a sequence of graph snapshots. Hence,…

Let $K_{r_1,\ldots,r_s}$ denote the complete multipartite graph with class sizes $r_1,\ldots,r_s$ and let $K_s$ denote the complete graph of order $s$. In 2018, Luo determined the maximum number of $K_s$ in 2-connected graphs with a given…

Local search is a widely-employed strategy for finding good solutions to Traveling Salesman Problem. We analyze the problem of determining whether the weight of a given cycle can be decreased by a popular $k$-opt move. Earlier work has…

This introduction to graphs and graph algebras provides the optimal bound for the number of all paths of length $k$ in a graph with $N\geq k$ edges and no loops. Our proof relies on a construction of a number of terminating algorithms that…

We define a labeling $f:$ $V(G)$ $\rightarrow$ $\{1, 2, \ldots, n\}$ on a graph $G$ of order $n \geq 3$ as a \emph{$k$-distance magic} ($k$-DM) if $\sum_{w\in \partial N_k(u)}{ f(w)}$ is a constant and independent of $u\in V(G)$ where…

In this paper, we devise a scheme for kernelizing, in sublinear space and polynomial time, various problems on planar graphs. The scheme exploits planarity to ensure that the resulting algorithms run in polynomial time and use O((sqrt(n) +…

For an undirected graph G=(V,E), a vertex x \in V separates vertices u and v (where u,v \in V, u \neq v) if their distances to x are not equal. Given an integer parameter k \geq 1, a set of vertices L \subseteq V is a feasible solution if…

The merging of succinct data structures is a well established technique for the space efficient construction of large succinct indexes. In the first part of the paper we propose a new algorithm for merging succinct representations of de…

Discovering the underlying structure of a given graph is one of the fundamental goals in graph mining. Given a graph, we can often order vertices in a way that neighboring vertices have a higher probability of being connected to each other.…

We show how to store a searchable partial-sums data structure with constant query time for a static sequence $S$ of $n$ positive integers in $o \left( \frac{\log n}{(\log \log n)^2} \right)$, in $n H_k (S) + o (n)$ bits for $k \in o \left(…

We study the problem of counting $k$-hypergraphlets, an interesting but surprisingly ignored primitive, with the aim of understanding whether efficient algorithms exist. To this end, we consider color coding, a well-known technique for…

We show that the 2-dimensional Weisfeiler-Leman algorithm stabilizes n-vertex graphs after at most O(n log n) iterations. This implies that if such graphs are distinguishable in 3-variable first order logic with counting, then they can also…

In the graph label selection problem, one is given an $n$-vertex graph and a budget $k$, and seeks to select $k$ vertices whose labels enable accurate prediction of the labels on the remaining vertices. This problem formalizes distilling a…

Let k be a natural number. We introduce k-threshold graphs. We show that there exists an O(n^3) algorithm for the recognition of k-threshold graphs for each natural number k. k-Threshold graphs are characterized by a finite collection of…

The problem of listing the $K$ shortest simple (loopless) $st$-paths in a graph has been studied since the early 1960s. For a non-negatively weighted graph with $n$ vertices and $m$ edges, the most efficient solution is an $O(K(mn + n^2…

Given a connected graph $G$ on $n$ vertices and a positive integer $k\le n$, a subgraph of $G$ on $k$ vertices is called a $k$-subgraph in $G$. We design combinatorial approximation algorithms for finding a connected $k$-subgraph in $G$…