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Related papers: RAPTOR-GEN: RApid PosTeriOR GENerator for Bayesian…

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Neural conversational models learn to generate responses by taking into account the dialog history. These models are typically optimized over the query-response pairs with a maximum likelihood estimation objective. However, the…

Computation and Language · Computer Science 2020-03-05 Shaoxiong Feng , Hongshen Chen , Kan Li , Dawei Yin

Bayesian Generative AI (BayesGen-AI) methods are developed and applied to Bayesian computation. BayesGen-AI reconstructs the posterior distribution by directly modeling the parameter of interest as a mapping (a.k.a. deep learner) from a…

Computation · Statistics 2024-02-27 Nicholas G. Polson , Vadim Sokolov

This work presents a generative modeling approach based on successive subspace learning (SSL). Unlike most generative models in the literature, our method does not utilize neural networks to analyze the underlying source distribution and…

Computer Vision and Pattern Recognition · Computer Science 2022-08-24 Zohreh Azizi , C. -C. Jay Kuo

In recent years, promising deep learning based interatomic potential energy surface (PES) models have been proposed that can potentially allow us to perform molecular dynamics simulations for large scale systems with quantum accuracy.…

Computational Physics · Physics 2020-06-23 Yuzhi Zhang , Haidi Wang , Weijie Chen , Jinzhe Zeng , Linfeng Zhang , Han Wang , Weinan E

We present a machine learning approach for predicting the organisation of corneal, glial and fibroblast cells in 3D cultures used for tissue engineering. Our machine-learning-based method uses a powerful generative adversarial network…

Biological Physics · Physics 2025-02-13 Allison E. Andrews , Hugh Dickinson , Caitriona O'Rourke , James B. Philips , James P. Hague

Modern generative models are usually designed to match target distributions directly in the data space, where the intrinsic dimension of data can be much lower than the ambient dimension. We argue that this discrepancy may contribute to the…

Machine Learning · Computer Science 2020-07-02 Zijun Zhang , Ruixiang Zhang , Zongpeng Li , Yoshua Bengio , Liam Paull

Deep generative models have gained significant advancements to accelerate drug discovery by generating bioactive chemicals against desired targets. Nevertheless, most generated compounds that have been validated for potent bioactivity often…

Quantitative Methods · Quantitative Biology 2024-01-03 Weixin Xie , Jianhang Zhang , Qin Xie , Chaojun Gong , Youjun Xu , Luhua Lai , Jianfeng Pei

Extracting tables from documents is a critical task across various industries, especially on business documents like invoices and reports. Existing systems based on DEtection TRansformer (DETR) such as TAble TRansformer (TATR), offer…

Computer Vision and Pattern Recognition · Computer Science 2025-02-25 Eliott Thomas , Mickael Coustaty , Aurelie Joseph , Gaspar Deloin , Elodie Carel , Vincent Poulain D'Andecy , Jean-Marc Ogier

Predicting how cells respond to genetic perturbations is fundamental to understanding gene function, disease mechanisms, and therapeutic development. While recent deep learning approaches have shown promise in modeling single-cell…

Machine Learning · Computer Science 2026-03-10 Andrea Giuseppe Di Francesco , Andrea Rubbi , Pietro Liò

Quantifying biomechanical properties of the human vasculature could deepen our understanding of cardiovascular diseases. Standard nonlinear regression in constitutive modeling requires considerable high-quality data and an explicit form of…

Machine Learning · Computer Science 2023-09-26 Minglang Yin , Zongren Zou , Enrui Zhang , Cristina Cavinato , Jay D. Humphrey , George Em Karniadakis

Recent advances in large-scale pre-training such as GPT-3 allow seemingly high quality text to be generated from a given prompt. However, such generation systems often suffer from problems of hallucinated facts, and are not inherently…

Computation and Language · Computer Science 2022-02-25 Yizhe Zhang , Siqi Sun , Xiang Gao , Yuwei Fang , Chris Brockett , Michel Galley , Jianfeng Gao , Bill Dolan

Generating as diverse molecules as possible with desired properties is crucial for drug discovery research, which invokes many approaches based on deep generative models today. Despite recent advancements in these models, particularly in…

Machine Learning · Computer Science 2024-07-17 Changhun Lee , Gyumin Lee

Gaussian Probability Path based Generative Models (GPPGMs) generate data by reversing a stochastic process that progressively corrupts samples with Gaussian noise. Despite state-of-the-art results in 3D molecular generation, their…

Machine Learning · Computer Science 2026-02-23 Jingxiang Qu , Wenhan Gao , Ruichen Xu , Yi Liu

The rapid advancement of DNA sequencing has produced vast genomic datasets, yet interpreting and engineering genomic function remain fundamental challenges. Recent large language models have opened new avenues for genomic analysis, but…

The Bayesian inference approach is widely used to tackle inverse problems due to its versatile and natural ability to handle ill-posedness. However, it often faces challenges when dealing with situations involving continuous fields or…

Numerical Analysis · Mathematics 2023-08-28 Xinchao Jiang , Xin Wang , Ziming Wen , Hu Wang

Retrieval-augmented generation (RAG) has emerged as a pivotal method for expanding the knowledge of large language models. To handle complex queries more effectively, researchers developed Adaptive-RAG (A-RAG) to enhance the generated…

Artificial Intelligence · Computer Science 2025-05-27 Jie Ou , Jinyu Guo , Shuaihong Jiang , Zhaokun Wang , Libo Qin , Shunyu Yao , Wenhong Tian

Generative Adversarial Networks (GANs) are proficient at generating synthetic data but continue to suffer from mode collapse, where the generator produces a narrow range of outputs that fool the discriminator but fail to capture the full…

Machine Learning · Computer Science 2025-11-03 Mahsa Valizadeh , Rui Tuo , James Caverlee

Machine learning models are commonly trained end-to-end and in a supervised setting, using paired (input, output) data. Examples include recent super-resolution methods that train on pairs of (low-resolution, high-resolution) images.…

Computer Vision and Pattern Recognition · Computer Science 2021-12-10 Razvan V Marinescu , Daniel Moyer , Polina Golland

Remote sensing image fusion technology (pan-sharpening) is an important means to improve the information capacity of remote sensing images. Inspired by the efficient arameter space posteriori sampling of Bayesian neural networks, in this…

Computer Vision and Pattern Recognition · Computer Science 2020-09-22 Junfu Chen , Yue Pan , Yang Chen

We describe the design, implementation and performance of the RADICAL-Pilot task overlay (RAPTOR). RAPTOR enables the execution of heterogeneous tasks -- i.e., functions and executables with arbitrary duration -- on HPC platforms, providing…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-02 Andre Merzky , Matteo Turilli , Shantenu Jha
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