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Related papers: Uncovering Graph Reasoning in Decoder-only Transfo…

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Transformers were originally proposed as a sequence-to-sequence model for text but have become vital for a wide range of modalities, including images, audio, video, and undirected graphs. However, transformers for directed graphs are a…

Machine Learning · Computer Science 2023-09-01 Simon Geisler , Yujia Li , Daniel Mankowitz , Ali Taylan Cemgil , Stephan Günnemann , Cosmin Paduraru

Autoregressive decoder-only transformers have become key components for scalable sequence processing and generation models. However, the transformer's self-attention mechanism requires transferring prior token projections from the main…

Neural and Evolutionary Computing · Computer Science 2024-10-14 Jan Finkbeiner , Emre Neftci

Transformers have become a central architecture for graph learning, but their application to graphs requires first choosing a tokenization: a graph-to-token map that determines which structural information is exposed at the input. In this…

Machine Learning · Computer Science 2026-05-22 Maya Bechler-Speicher , Gilad Yehudai , Gil Harari , Clayton Sanford , Amir Globerson , Joan Bruna

The fields of explainable AI and mechanistic interpretability aim to uncover the internal structure of neural networks, with circuit discovery as a central tool for understanding model computations. Existing approaches, however, rely on…

Machine Learning · Computer Science 2026-03-05 Elena Golimblevskaia , Aakriti Jain , Bruno Puri , Ammar Ibrahim , Wojciech Samek , Sebastian Lapuschkin

Universal Multimodal Retrieval requires unified embedding models capable of interpreting diverse user intents, ranging from simple keywords to complex compositional instructions. While Multimodal Large Language Models (MLLMs) possess strong…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Xiangzhao Hao , Shijie Wang , Tianyu Yang , Tianyue Wang , Haiyun Guo , Jinqiao Wang

Large language models (LLMs) have recently achieved remarkable success in various reasoning tasks in the field of natural language processing. This success of LLMs has also motivated their use in graph-related tasks. Among others, recent…

Machine Learning · Computer Science 2024-09-27 Konstantinos Skianis , Giannis Nikolentzos , Michalis Vazirgiannis

Understanding the transformer architecture and its workings is essential for machine learning (ML) engineers. However, truly understanding the transformer architecture can be demanding, even if you have a solid background in machine…

Machine Learning · Computer Science 2025-02-28 Joni-Kristian Kämäräinen

Graph Transformers, which incorporate self-attention and positional encoding, have recently emerged as a powerful architecture for various graph learning tasks. Despite their impressive performance, the complex non-convex interactions…

Machine Learning · Computer Science 2024-06-05 Hongkang Li , Meng Wang , Tengfei Ma , Sijia Liu , Zaixi Zhang , Pin-Yu Chen

Recent advances in interpretability suggest we can project weights and hidden states of transformer-based language models (LMs) to their vocabulary, a transformation that makes them more human interpretable. In this paper, we investigate LM…

Computation and Language · Computer Science 2023-11-27 Shahar Katz , Yonatan Belinkov

To address the challenges of table structure recognition, we propose a novel Split-Merge-based top-down model optimized for large, densely populated tables. Our approach formulates row and column splitting as sequence labeling tasks,…

Computer Vision and Pattern Recognition · Computer Science 2025-10-20 Qiyu Hou , Jun Wang

In this paper, we study the problem of text line recognition. Unlike most approaches targeting specific domains such as scene-text or handwritten documents, we investigate the general problem of developing a universal architecture that can…

Computer Vision and Pattern Recognition · Computer Science 2021-04-23 Daniel Hernandez Diaz , Siyang Qin , Reeve Ingle , Yasuhisa Fujii , Alessandro Bissacco

Transformer based language models exhibit intelligent behaviors such as understanding natural language, recognizing patterns, acquiring knowledge, reasoning, planning, reflecting and using tools. This paper explores how their underlying…

Machine Learning · Computer Science 2023-11-15 Sumeet S. Singh

The field of natural language processing (NLP) has witnessed significant progress in recent years, with a notable focus on improving large language models' (LLM) performance through innovative prompting techniques. Among these, prompt…

Search is an ability foundational in many important tasks, and recent studies have shown that large language models (LLMs) struggle to perform search robustly. It is unknown whether this inability is due to a lack of data, insufficient…

Motivated by the limitations of current spectral analysis methods-such as reliance on single-modality data, limited generalizability, and poor interpretability-we propose a novel multi-modal spectral analysis framework that integrates prior…

Machine Learning · Computer Science 2025-09-03 Jiheng Liang , Ziru Yu , Zujie Xie , Yuchen Guo , Yulan Guo , Xiangyang Yu

Dynamic graph clustering aims to detect and track time-varying clusters in dynamic graphs, revealing how complex real-world systems evolve over time. However, existing methods are predominantly black-box models. They lack interpretability…

Machine Learning · Computer Science 2026-03-17 Dongyuan Li , Ying Zhang , Yaozu Wu , Renhe Jiang

Despite the popularity of transformers in practice, their architectures are empirically designed and neither mathematically justified nor interpretable. Moreover, as indicated by many empirical studies, some components of transformer…

Machine Learning · Computer Science 2025-06-05 Peng Wang , Yifu Lu , Yaodong Yu , Druv Pai , Qing Qu , Yi Ma

This paper examines the capacity of LLMs to reason with knowledge graphs using their internal knowledge graph, i.e., the knowledge graph they learned during pre-training. Two research questions are formulated to investigate the accuracy of…

Computation and Language · Computer Science 2023-12-04 Pei-Chi Lo , Yi-Hang Tsai , Ee-Peng Lim , San-Yih Hwang

In this paper, I introduce the retrieval problem, a simple yet common reasoning task that can be solved only by transformers with a minimum number of layers, which grows logarithmically with the input size. I empirically show that large…

Machine Learning · Computer Science 2025-10-29 Tiberiu Musat

Graphs are ubiquitous data structures for representing interactions between entities. With an emphasis on the use of graphs to represent chemical molecules, we explore the task of learning to generate graphs that conform to a distribution…

Machine Learning · Computer Science 2019-03-08 Qi Liu , Miltiadis Allamanis , Marc Brockschmidt , Alexander L. Gaunt