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Recent years have witnessed the success of heterogeneous graph neural networks (HGNNs) in modeling heterogeneous information networks (HINs). In this paper, we focus on the benchmark task of HGNNs, i.e., node classification, and empirically…

Social and Information Networks · Computer Science 2023-04-04 Cheng Yang , Xumeng Gong , Chuan Shi , Philip S. Yu

Automated analysis of electroencephalography (EEG) has recently undergone a paradigm shift. The introduction of transformer architectures and self-supervised pretraining (SSL) has led to the development of EEG foundation models. These…

Neurons and Cognition · Quantitative Biology 2026-02-04 Hannah Portmann , Yosuke Morishima

Electroencephalography provides a non-invasive window into brain activity, offering valuable insights for neurological research, brain-computer interfaces, and clinical diagnostics. However, the development of robust machine learning models…

Signal Processing · Electrical Eng. & Systems 2025-02-26 Chi-Sheng Chen , Ying-Jung Chen , Aidan Hung-Wen Tsai

The electrocardiogram (ECG) is a key diagnostic tool in cardiovascular health. Single-lead ECG recording is integrated into both clinical-grade and consumer wearables. While self-supervised pretraining of foundation models on unlabeled ECGs…

Machine Learning · Computer Science 2025-12-03 Yuxuan Shu , Peter H. Charlton , Fahim Kawsar , Jussi Hernesniemi , Mohammad Malekzadeh

Clinical risk prediction using longitudinal medical data supports individualized care. Self-supervised foundation models have emerged as a promising approach for leveraging large-scale unlabeled healthcare records. In natural language…

Electrocardiography is a very common, non-invasive diagnostic procedure and its interpretation is increasingly supported by automatic interpretation algorithms. The progress in the field of automatic ECG interpretation has up to now been…

Machine Learning · Computer Science 2020-04-29 Nils Strodthoff , Patrick Wagner , Tobias Schaeffter , Wojciech Samek

Objective: The use of deep learning for electroencephalography (EEG) classification tasks has been rapidly growing in the last years, yet its application has been limited by the relatively small size of EEG datasets. Data augmentation,…

Machine Learning · Computer Science 2022-11-16 Cédric Rommel , Joseph Paillard , Thomas Moreau , Alexandre Gramfort

Foundation models for time series are emerging as powerful general-purpose backbones, yet their potential for domain-specific biomedical signals such as electroencephalography (EEG) remains rather unexplored. In this work, we investigate…

Machine Learning · Computer Science 2025-11-03 Théo Gnassounou , Yessin Moakher , Shifeng Xie , Vasilii Feofanov , Ievgen Redko

Electrocardiogram (ECG) classification is crucial for automated cardiac disease diagnosis, yet existing methods often struggle to capture local morphological details and long-range temporal dependencies simultaneously. To address these…

Machine Learning · Computer Science 2025-05-12 Md Kamrujjaman Mobin , Md Saiful Islam , Sadik Al Barid , Md Masum

Electrocardiogram (ECG) signal exhibits inherent uniqueness, making it a promising biometric modality for identity authentication. As a result, ECG authentication has gained increasing attention in recent years. However, most existing…

Cryptography and Security · Computer Science 2025-04-29 Mingyu Dong , Zhidong Zhao , Hao Wang , Yefei Zhang , Yanjun Deng

Foundation models have recently gained significant attention because of their generalizability and adaptability across multiple tasks and data distributions. Although medical foundation models have emerged, solutions for cardiac imaging,…

Computer Vision and Pattern Recognition · Computer Science 2025-01-30 Sekeun Kim , Pengfei Jin , Sifan Song , Cheng Chen , Yiwei Li , Hui Ren , Xiang Li , Tianming Liu , Quanzheng Li

With the rise of powerful foundation models, a pre-training-fine-tuning paradigm becomes increasingly popular these days: A foundation model is pre-trained using a huge amount of data from various sources, and then the downstream users only…

Machine Learning · Computer Science 2025-04-16 Meiqi Liu , Zhuoqun Huang , Yue Xing

Brain computer interface (BCI) research, as well as increasing portions of the field of neuroscience, have found success deploying large-scale artificial intelligence (AI) pre-training methods in conjunction with vast public repositories of…

Neurons and Cognition · Quantitative Biology 2025-06-03 Mattson Ogg , Rahul Hingorani , Diego Luna , Griffin W. Milsap , William G. Coon , Clara A. Scholl

Scaling EEG foundation models requires pooling data across heterogeneous electrode montages, a prerequisite both for larger pretraining corpora and for downstream deployment. We present the first systematic comparison of four channel…

Machine Learning · Computer Science 2026-04-28 Kuntal Kokate , Bruno Aristimunha , Dung Truong , Arnaud Delorme

Myocardial infarction (MI) is a leading cause of death, and its adverse outcomes are urgent to predict. Yet ECG-based prognostic models underperform because deep learning requires large, labelled datasets, which are scarce in medicine.…

Sleep foundation models have recently demonstrated strong performance on in-domain polysomnography tasks, including sleep staging, apnea detection, and disease risk prediction. In this work, we investigate whether sleep biosignals can serve…

Decoding EEG during motor imagery is pivotal for the Brain-Computer Interface (BCI) system, influencing its overall performance significantly. As end-to-end data-driven learning methods advance, the challenge lies in balancing model…

Human-Computer Interaction · Computer Science 2025-01-28 Param Rajpura , Yogesh Kumar Meena

Objective: Electrocardiogram (ECG) signals commonly suffer noise interference, such as baseline wander. High-quality and high-fidelity reconstruction of the ECG signals is of great significance to diagnosing cardiovascular diseases.…

Signal Processing · Electrical Eng. & Systems 2023-01-19 Huayu Li , Gregory Ditzler , Janet Roveda , Ao Li

Fine-tuning large-scale pretrained models has led to tremendous progress in well-studied modalities such as vision and NLP. However, similar gains have not been observed in many other modalities due to a lack of relevant pretrained models.…

Machine Learning · Computer Science 2023-03-21 Junhong Shen , Liam Li , Lucio M. Dery , Corey Staten , Mikhail Khodak , Graham Neubig , Ameet Talwalkar

Clinical EEG interpretation requires reasoning over full EEG sessions and integrating signal patterns with clinical context. Existing EEG foundation models are largely designed for short-window decoding and do not incorporate clinical…

Artificial Intelligence · Computer Science 2026-05-12 Peng Cao , Ali Mirzazadeh , Jong Woo Lee , Aleksandar Videnovic , Dina Katabi