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The network density matrix formalism allows for describing the dynamics of information on top of complex structures and it has been successfully used to analyze from system's robustness to perturbations to coarse graining multilayer…

Physics and Society · Physics 2023-05-03 Arsham Ghavasieh , Manlio De Domenico

We explore a novel method to generate and characterize complex networks by means of their embedding on hyperbolic surfaces. Evolution through local elementary moves allows the exploration of the ensemble of networks which share common…

Statistical Mechanics · Physics 2007-09-19 T. Aste , T. Di Matteo , S. T. Hyde

Flow networks are essential for both living organisms and enginneered systems. These networks often present complex dynamics controlled, at least in part, by their topology. Previous works have shown that topologically complex networks…

Soft Condensed Matter · Physics 2020-03-24 Miguel Ruiz-Garcia , Eleni Katifori

Complex network topologies and hyperbolic geometry seem specularly connected, and one of the most fascinating and challenging problems of recent complex network theory is to map a given network to its hyperbolic space. The Popularity…

Disordered Systems and Neural Networks · Physics 2017-12-08 Josephine Maria Thomas , Alessandro Muscoloni , Sara Ciucci , Ginestra Bianconi , Carlo Vittorio Cannistraci

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

Algebraic Topology · Mathematics 2023-10-03 Omer Bobrowski , Primoz Skraba

The behavior of complex systems is determined not only by the topological organization of their interconnections but also by the dynamical processes taking place among their constituents. A faithful modeling of the dynamics is essential…

Physics and Society · Physics 2015-05-20 R. Lambiotte , R. Sinatra , J. -C. Delvenne , T. S. Evans , M. Barahona , V. Latora

Identifying and comparing topological features, particularly cycles, across different topological objects remains a fundamental challenge in persistent homology and topological data analysis. This work introduces a novel framework for…

Quantitative Methods · Quantitative Biology 2025-12-16 Sixtus Dakurah

Simplicial complexes capture the underlying network topology and geometry of complex systems ranging from the brain to social networks. Here we show that algebraic topology is a fundamental tool to capture the higher-order dynamics of…

Disordered Systems and Neural Networks · Physics 2021-07-12 Reza Ghorbanchian , Juan G. Restrepo , Joaquín J. Torres , Ginestra Bianconi

We consider a class of random, weighted networks, obtained through a redefinition of patterns in an Hopfield-like model and, by performing percolation processes, we get information about topology and resilience properties of the networks…

Statistical Mechanics · Physics 2015-05-30 Elena Agliari , Claudia Cioli , Enore Guadagnini

Community detection algorithms have been widely used to study the organization of complex systems like the brain. A principal appeal of these techniques is their ability to identify a partition of brain regions (or nodes) into communities,…

Neurons and Cognition · Quantitative Biology 2017-04-20 Arian Ashourvan , Qawi K. Telesford , Timothy Verstynen , Jean M. Vettel , Danielle S. Bassett

Network centrality measures play a crucial role in understanding graph structures, assessing the importance of nodes, paths, or cycles based on directed or reciprocal interactions encoded by vertices and edges. Estrada and Ross extended…

Computational Geometry · Computer Science 2024-04-26 John Rick D. Manzanares , Paul Samuel P. Ignacio

Network filtering is an important form of dimension reduction to isolate the core constituents of large and interconnected complex systems. We introduce a new technique to filter large dimensional networks arising out of dynamical behavior…

Machine Learning · Statistics 2021-01-25 Arnab Chakrabarti , Anindya S. Chakrabarti

Topological data analysis has recently been applied to the study of dynamic networks. In this context, an algorithm was introduced and helps, among other things, to detect early warning signals of abnormal changes in the dynamic network…

Algebraic Topology · Mathematics 2022-10-18 Bouchaib Azamir , Driss Bennis , Bertrand Michel

Analyzing and understanding the structure of complex relational data is important in many applications including analysis of the connectivity in the human brain. Such networks can have prominent patterns on different scales, calling for a…

Machine Learning · Statistics 2013-11-22 Mikkel N. Schmidt , Tue Herlau , Morten Mørup

The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

Machine Learning · Computer Science 2024-02-13 Lorenzo Giusti

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of…

We use topological data analysis to study "functional networks" that we construct from time-series data from both experimental and synthetic sources. We use persistent homology with a weight rank clique filtration to gain insights into…

Quantitative Methods · Quantitative Biology 2017-05-24 Bernadette J. Stolz , Heather A. Harrington , Mason A. Porter

Many real networks are complex and have power-law vertex degree distribution, short diameter, and high clustering. We analyze the network model based on thresholding of the summed vertex weights, which belongs to the class of networks…

Other Condensed Matter · Physics 2007-05-23 Naoki Masuda , Hiroyoshi Miwa , Norio Konno

Polymer networks invariably possess topological inhomogeneities in the form of loops and dangling ends. The macroscopic properties of such materials are directly dependent on the local cyclic topology around nodes and chains. Here, a new…

Materials Science · Physics 2024-06-27 Devosmita Sen , Bradley D. Olsen

Model compression is an essential technique for deploying deep neural networks (DNNs) on power and memory-constrained resources. However, existing model-compression methods often rely on human expertise and focus on parameters' local…

Computer Vision and Pattern Recognition · Computer Science 2022-07-04 Sixing Yu , Arya Mazaheri , Ali Jannesari
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