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The classification of states of matter and their corresponding phase transitions is a special kind of machine-learning task, where physical data allow for the analysis of new algorithms, which have not been considered in the general…

Strongly Correlated Electrons · Physics 2018-04-30 Ye-Hua Liu , Evert P. L. van Nieuwenburg

In science and engineering, intelligent processing of complex signals such as images, sound or language is often performed by a parameterized hierarchy of nonlinear processing layers, sometimes biologically inspired. Hierarchical systems…

Machine Learning · Computer Science 2012-12-27 Miguel Á. Carreira-Perpiñán , Weiran Wang

Dynamical systems are found in innumerable forms across the physical and biological sciences, yet all these systems fall naturally into universal equivalence classes: conservative or dissipative, stable or unstable, compressible or…

Machine Learning · Computer Science 2023-02-28 Matthew Ricci , Noa Moriel , Zoe Piran , Mor Nitzan

We present a distributed algorithm for a swarm of active particles to camouflage in an environment. Each particle is equipped with sensing, computation and communication, allowing the system to take color and gradient information from the…

Robotics · Computer Science 2017-09-22 Yang Li , John Klingner , Nikolaus Correll

Living systems are capable of locomotion, reconfiguration, and replication. To perform these tasks, cells spatiotemporally coordinate the interactions of force-generating, "active" molecules that create and manipulate non-equilibrium…

Soft Condensed Matter · Physics 2019-08-28 Tyler D. Ross , Heun Jin Lee , Zijie Qu , Rachel A. Banks , Rob Phillips , Matt Thomson

In this work we introduce an Autoencoder for molecular conformations. Our proposed model converts the discrete spatial arrangements of atoms in a given molecular graph (conformation) into and from a continuous fixed-sized latent…

Machine Learning · Computer Science 2021-01-06 Robin Winter , Frank Noé , Djork-Arné Clevert

With the rise of large-scale foundation models, efficiently adapting them to downstream tasks remains a central challenge. Linear probing, which freezes the backbone and trains a lightweight head, is computationally efficient but often…

Computer Vision and Pattern Recognition · Computer Science 2026-01-15 Laure Ciernik , Marco Morik , Lukas Thede , Luca Eyring , Shinichi Nakajima , Zeynep Akata , Lukas Muttenthaler

Active networks made of biopolymers and motor proteins are valuable bioinspired systems that have been used in the last decades to study the cytoskeleton and its self-organization under mechanical stimulation. Different techniques are…

Soft Condensed Matter · Physics 2023-05-15 Vahid Nasirimarekani , Olinka Ramìrez-Soto , Stefan Karpitschka , Isabella Guido

Phase separation has emerged as an essential concept for the spatial organization inside biological cells. However, despite the clear relevance to virtually all physiological functions, we understand surprisingly little about what phases…

Biological Physics · Physics 2022-08-10 David Zwicker , Liedewij Laan

Nature provides us with abundant examples of how large numbers of individuals can make decisions without the coordination of a central authority. Social insects, birds, fishes, and many other living collectives, rely on simple interaction…

Robotics · Computer Science 2019-12-19 Gabriele Valentini

The spontaneous organization of collective activities in animal groups and societies has attracted a considerable amount of attention over the last decade. This kind of coordination often permits group-living species to achieve collective…

Physics and Society · Physics 2010-05-20 Mehdi Moussaid , Simon Garnier , Guy Theraulaz , Dirk Helbing

Massive data collection holds the promise of a better understanding of complex phenomena and, ultimately, better decisions. Representation learning has become a key driver of deep learning applications, as it allows learning latent spaces…

Machine Learning · Computer Science 2025-11-10 Caroline Uhler , Jiaqi Zhang

The article reviews significant advances in networked signal and information processing, which have enabled in the last 25 years extending decision making and inference, optimization, control, and learning to the increasingly ubiquitous…

Signal Processing · Electrical Eng. & Systems 2023-08-02 Stefan Vlaski , Soummya Kar , Ali H. Sayed , José M. F. Moura

It is crucial to learn the shared structures among functional predictors, as these structures characterize how predictor components exert common effects and, more generally, how predictors are homogeneously associated with the response.…

Methodology · Statistics 2026-04-27 Shuhao Jiao , Hernando Ombao , Ian W. McKeague

Surface-driven flows are ubiquitous in nature, from subcellular cytoplasmic streaming to organ-scale ciliary arrays. Here, we model how confined geometries can be used to engineer complex hydrodynamic patterns driven by activity prescribed…

Biological Physics · Physics 2020-04-06 Xingting Gong , Arnold Mathijssen , Zev Bryant , Manu Prakash

It has previously been hypothesized, and supported with some experimental evidence, that deeper representations, when well trained, tend to do a better job at disentangling the underlying factors of variation. We study the following related…

Machine Learning · Computer Science 2012-07-19 Yoshua Bengio , Grégoire Mesnil , Yann Dauphin , Salah Rifai

Machine Learning tools are nowadays widely applied extensively to the prediction of the properties of molecular materials, using datasets extracted from high-throughput computational models. In several cases of scientific and technological…

Materials Science · Physics 2021-02-10 Fabio Le Piane , Matteo Baldoni , Francesco Mercuri

Within simulations of molecules deposited on a surface we show that neuroevolutionary learning can design particles and time-dependent protocols to promote self-assembly, without input from physical concepts such as thermal equilibrium or…

Statistical Mechanics · Physics 2021-07-07 Stephen Whitelam , Isaac Tamblyn

Transformers have shown great success in learning representations for language modelling. However, an open challenge still remains on how to systematically aggregate semantic information (word embedding) with positional (or temporal)…

Computation and Language · Computer Science 2020-09-22 Juyong Jiang , Jie Zhang , Kai Zhang

Cellular membranes exhibit a large variety of shapes, strongly coupled to their function. Many biological processes involve dynamic reshaping of membranes, usually mediated by proteins. This interaction works both ways: while proteins…

Soft Condensed Matter · Physics 2018-06-12 Afshin Vahid , Anđela Šarić , Timon Idema
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