Related papers: Phyllotaxis in a Keller-Segel model
We show through rigorous calculations that dielectric microspheres can be organized by an incident electromagnetic plane wave into stable cluster configurations, which we call photonic molecules. The long-range optical binding force arises…
We study a doubly parabolic Keller-Segel system in one spatial dimension, with diffusions given by fractional laplacians. We obtain several local and global well-posedness results for the subcritical and critical cases (for the latter we…
We consider a simplified chemotaxis model of tumor angiogenesis, described by a Keller-Segel system on the two dimensional infinite cylindrical domain $(x, y) \in \mathbb{R} \times {\mathbf S^{\lambda}}$, where $ \mathbf S^{\lambda}$ is the…
We numerically investigate a diffusion-reaction model of an ombrotrophic peatland implementing a Turing instability relying on nutrient accumulation. We propose a systematic and quantitative sorting of the vegetation patterns, based on the…
We demonstrate that active rotations in chemically signalling particles, such as autochemotactic {\it E. coli} close to walls, create a route for pattern formation based on a nonlinear yet deterministic instability mechanism. For slow…
A spiral in $\mathbb{R}^{d+1}$ is defined as a set of the form $\left\{\sqrt[d+1]{n}\cdot\boldsymbol{u}_n\right\}_{n\ge 1},$ where $\left(\boldsymbol{u}_n\right)_{n\ge 1}$ is a spherical sequence. Such point sets have been extensively…
The original problem of phyllotaxis was focused on the regular arrangements of leaves on mature stems represented by common fractions such as 1/2, 1/3, 2/5, 3/8, 5/13, etc. The phyllotaxis fraction is not fixed for each plant but it may…
We investigate a one dimensional flux limited Keller Segel system (FLKS) in which the chemical decay rate is allowed to vary explicitly in time, a feature motivated by enzymatic regulation and environmental variability in chemotactic…
A big challenge in current biology is to understand the exact self-organization mechanism underlying complex multi-physics coupling developmental processes. With multiscale computations of from subcellular gene expressions to cell…
Consistency models have been proposed for fast generative modeling, achieving results competitive with diffusion and flow models. However, these methods exhibit inherent instability and limited reproducibility when training from scratch,…
Mean flow effects are discussed for two different pattern-forming systems: Rayleigh-Benard convection and Faraday instability in viscous fluid. In both systems spirals are observed in certain parameter regions. In the Rayleigh-Benard…
This work is a series of two articles. The main goal is to rigorously derive the degenerate parabolic-elliptic Keller-Segel system in the sub-critical regime from a moderately interacting stochastic particle system. In the first article…
Communicating cells can coordinate their gene expressions to form spatial patterns. 'Secrete-and-sense cells' secrete and sense the same molecule to do so and are ubiquitous. Here we address why and how these cells, from disordered…
We propose a model for cell migration where epithelial cells are able to detect trajectories of other cells and try to follow them. As cells move along in 2D cell culture, they mark their paths by loosing tiny parts of cytoplasm. Any cell…
Type I collagen fibrils have circular cross sections with radii mostly distributed in between 50 and 100 nm and are characterized by an axial banding pattern with a period of 67 nm. The constituent long molecules of those fibrils, the…
Plants are a paradigm for active shape control in response to stimuli. For instance, it is well-known that a tilted plant will eventually straighten vertically, demonstrating the influence of both an external stimulus, gravity, and an…
There are few explicit examples in the literature of vector fields exhibiting complex dynamics that may be proved analytically. We construct explicitly a {two parameter family of vector fields} on the three-dimensional sphere $\EU^3$, whose…
We introduce a multi-species diffuse interface model for tumor growth, characterized by its incorporation of essential features related to chemotaxis, angiogenesis and proliferation mechanisms. We establish the weak well-posedness of the…
The run and tumble process is well established in order to describe the movement of bacteria in response to a chemical stimulus. However the relation between the tumbling rate and the internal state of bacteria is poorly understood. The…
We perform stability analysis of a kinetic bacterial chemotaxis model of bacterial self-organization, assuming that bacteria respond sharply to chemical signals. The resulting discontinuous tumbling kernel represents the key challenge for…