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Swarming phenomena are ubiquitous in various physical, biological, and social systems, where simple local interactions between individual units lead to complex global patterns. A common feature of diverse swarming phenomena is that the…

Statistical Mechanics · Physics 2023-04-05 Yang Tian , Yunhui Xu , Pei Sun

"Self-organization" has become a watchword in developmental biology, characterizing observations in which embryonic or induced stem cells of animals replicate morphological steps and outcomes seen in intact embryos. While the term was…

Tissues and Organs · Quantitative Biology 2021-11-24 Stuart A. Newman

The co-optimization of a robot's body and brain presents a coupled challenge: the morphology constrains which control strategies are effective, while the control determines how well the morphology performs. To address this, we combine…

Robotics · Computer Science 2026-05-18 K. Ege de Bruin , Kyrre Glette , Kai Olav Ellefsen

Conventional temporal causal discovery (CD) methods suffer from high dimensionality, fail to identify lagged causal relationships, and often ignore dynamics in relations. In this study, we present a novel constraint-based CD approach for…

Machine Learning · Computer Science 2023-03-07 Muhammad Hasan Ferdous , Uzma Hasan , Md Osman Gani

The neocortex, a complex system driving multi-region interactions, remains a core puzzle in neuroscience. Despite quantitative insights across brain scales, understanding the mechanisms underlying neural activities is challenging. Advances…

Neurons and Cognition · Quantitative Biology 2024-11-27 Xiaochen Wang , Yuxuan Wu , Feng Zhang , Jin Wang

Movement is fundamental to life, shaping population dynamics, biodiversity patterns, and ecosystem structure. Recent advances in tracking technology have enabled fundamental questions about movement to be tackled, leading to the development…

Populations and Evolution · Quantitative Biology 2020-06-02 Rocío Joo , Simona Picardi , Matthew E. Boone , Thomas A. Clay , Samantha C. Patrick , Vilma S. Romero-Romero , Mathieu Basille

The measurement of information flows within moving animal groups has recently been a topic of considerable interest, and it has become clear that the individual(s) that drive collective movement may change over time, and that such…

Quantitative Methods · Quantitative Biology 2013-11-07 Thomas O. Richardson , Nicolas Perony , Claudio J. Tessone , Christophe A. H. Bousquet , Marta B. Manser , Frank Schweitzer

1. Spatial memory plays a role in the way animals perceive their environments, resulting in memory-informed movement patterns that are observable to ecologists. Developing mathematical techniques to understand how animals use memory in…

Quantitative Methods · Quantitative Biology 2022-02-17 Peter R. Thompson , Andrew E. Derocher , Mark A. Edwards , Mark A. Lewis

We introduce Temporal Residual Jacobians as a novel representation to enable data-driven motion transfer. Our approach does not assume access to any rigging or intermediate shape keyframes, produces geometrically and temporally consistent…

Computer Vision and Pattern Recognition · Computer Science 2024-07-23 Sanjeev Muralikrishnan , Niladri Shekhar Dutt , Siddhartha Chaudhuri , Noam Aigerman , Vladimir Kim , Matthew Fisher , Niloy J. Mitra

We introduce history-dependent discrete-time quantum random walk models by adding uncorrelated memory terms and also by modifying Hamiltonian of the walker to include couplings with memory-keeping agents. We next numerically study the…

Quantum Physics · Physics 2009-07-10 J. B. Stang , A. T. Rezakhani , B. C. Sanders

Dynamic graph-level embedding aims to capture structural evolution in networks, which is essential for modeling real-world scenarios. However, existing methods face two critical yet under-explored issues: Structural Visit Bias, where random…

Machine Learning · Computer Science 2025-08-22 Haodi Zhong , Liuxin Zou , Di Wang , Bo Wang , Zhenxing Niu , Quan Wang

L\'evy walks are found in the migratory behaviour patterns of various organisms, and the reason for this phenomenon has been much discussed. We use simulations to demonstrate that learning causes the changes in confidence level during…

The distribution of information is essential for living system's ability to coordinate and adapt. Random walkers are often used to model this distribution process and, in doing so, one effectively assumes that information maintains its…

Statistical Mechanics · Physics 2010-03-12 Ludvig Lizana , Martin Rosvall , Kim Sneppen

Detecting early warning signals in climatic time series is essential for anticipating critical transitions and tipping points. Common statistical indicators include increased variance and lag-one autocorrelation prior to bifurcation points.…

Methodology · Statistics 2026-02-11 Sigrunn H. Sørbye , Eirik Myrvoll-Nilsen , Håvard Rue

Elephant random walk, introduced to study the effect of memory on random walks, is a novel type of walk that incorporates the information of one randomly chosen past step to determine the future step. However, memory of a process can be…

Probability · Mathematics 2025-09-15 Krishanu Maulik , Parthanil Roy , Tamojit Sadhukhan

Self-avoiding random walks on graphs can be seen as walkers interacting with their own past history. This letter considers a complementary class of dynamics: Mutual future avoiding random walks (MFARWs), where stochastically driven walkers…

Adaptation and Self-Organizing Systems · Physics 2026-02-04 A. Schmaus , K. Stiller , N. Molkenthin

Cell movement and intercellular signaling occur simultaneously during the development of tissues, but little is known about how movement affects signaling. Previous theoretical studies have shown that faster moving cells favor…

Cell Behavior · Quantitative Biology 2012-05-09 Koichiro Uriu , Saul Ares , Andrew C. Oates , Luis G. Morelli

Biological information processing manifests a huge variety in its complexity and capability among different organisms, which presumably stems from the evolutionary optimization under limited computational resources. Starting from the…

Biological Physics · Physics 2025-10-21 Takehiro Tottori , Tetsuya J. Kobayashi

A core challenge for the brain is to process information across various timescales. This could be achieved by a hierarchical organization of temporal processing through intrinsic mechanisms (e.g., recurrent coupling or adaptation), but…

Neurons and Cognition · Quantitative Biology 2024-01-18 Lucas Rudelt , Daniel González Marx , F. Paul Spitzner , Benjamin Cramer , Johannes Zierenberg , Viola Priesemann

We present insights and empirical results from an extensive numerical study of the evolutionary dynamics of the iterated prisoner's dilemma. Fixation probabilities for Moran processes are obtained for all pairs of 164 different strategies…

Computer Science and Game Theory · Computer Science 2020-02-11 Vincent Knight , Marc Harper , Nikoleta E. Glynatsi , Owen Campbell