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Referring expression segmentation (RES) aims at segmenting the foreground masks of the entities that match the descriptive natural language expression. Previous datasets and methods for classic RES task heavily rely on the prior assumption…

Computer Vision and Pattern Recognition · Computer Science 2024-03-22 Wenxuan Wang , Tongtian Yue , Yisi Zhang , Longteng Guo , Xingjian He , Xinlong Wang , Jing Liu

Four-dimensional scanning transmission electron microscopy (4D-STEM) provides rich, atomic-scale insights into materials structures. However, extracting specific physical properties - such as polarization directions essential for…

We propose EMMA, an efficient and unified architecture for multimodal understanding, generation and editing. Specifically, EMMA primarily consists of 1) An efficient autoencoder with a 32x compression ratio, which significantly reduces the…

Computer Vision and Pattern Recognition · Computer Science 2025-12-16 Xin He , Longhui Wei , Jianbo Ouyang , Minghui Liao , Lingxi Xie , Qi Tian

Recently, significant progress has been made applying machine learning to the problem of table structure inference and extraction from unstructured documents. However, one of the greatest challenges remains the creation of datasets with…

Machine Learning · Computer Science 2021-11-22 Brandon Smock , Rohith Pesala , Robin Abraham

Background: Single-particle cryo-electron microscopy (cryo-EM) has become a popular tool for structural determination of biological macromolecular complexes. High-resolution cryo-EM reconstruction often requires hundreds of thousands of…

Data Analysis, Statistics and Probability · Physics 2017-09-05 Yanan Zhu , Qi Ouyang , Youdong Mao

We present ENSAM (Equivariant, Normalized, Segment Anything Model), a lightweight and promptable model for universal 3D medical image segmentation. ENSAM combines a SegResNet-based encoder with a prompt encoder and mask decoder in a…

Computer Vision and Pattern Recognition · Computer Science 2025-09-22 Elias Stenhede , Agnar Martin Bjørnstad , Arian Ranjbar

Micro-ultrasound (micro-US) is a novel 29-MHz ultrasound technique that provides 3-4 times higher resolution than traditional ultrasound, potentially enabling low-cost, accurate diagnosis of prostate cancer. Accurate prostate segmentation…

Identifying complex neural circuitry from electron microscopic (EM) images may help unlock the mysteries of the brain. However, identifying this circuitry requires time-consuming, manual tracing (proofreading) due to the size and intricacy…

Quantitative Methods · Quantitative Biology 2014-09-04 Stephen M. Plaza

Enhancing cryogenic electron microscopy (cryo-EM) 3D density maps at intermediate resolution (4-8 {\AA}) is crucial in protein structure determination. Recent advances in deep learning have led to the development of automated approaches for…

Computer Vision and Pattern Recognition · Computer Science 2025-05-16 Chenwei Zhang , Khanh Dao Duc

Recently, large language models (LLMs) have achieved remarkable breakthroughs in general domains such as programming and writing, and have demonstrated strong potential in various scientific research scenarios. However, the capabilities of…

Machine Learning · Computer Science 2025-09-16 Yonghao Weng , Liqiang Gao , Linwu Zhu , Jian Huang

High resolution volumetric neuroimaging datasets from electron microscopy (EM) and x-ray micro and holographic-nano tomography (XRM/XHN) are being generated at an increasing rate and by a growing number of research teams. These datasets are…

Fine-grained image classification remains challenging due to the large intra-class variance and small inter-class variance. Since the subtle visual differences are only in local regions of discriminative parts among subcategories, part…

Computer Vision and Pattern Recognition · Computer Science 2022-04-01 Runsheng Zhang , jian zhang , Yaping Huang , Qi Zou

This paper investigates the application of deep convolutional neural networks with prohibitively small datasets to the problem of macular edema segmentation. In particular, we investigate several different heavily regularized architectures.…

Image and Video Processing · Electrical Eng. & Systems 2020-05-12 Jonathan Frawley , Chris G. Willcocks , Maged Habib , Caspar Geenen , David H. Steel , Boguslaw Obara

In the rapidly evolving field of autonomous driving, precise segmentation of LiDAR data is crucial for understanding complex 3D environments. Traditional approaches often rely on disparate, standalone codebases, hindering unified…

Computer Vision and Pattern Recognition · Computer Science 2024-05-31 Jiahao Sun , Chunmei Qing , Xiang Xu , Lingdong Kong , Youquan Liu , Li Li , Chenming Zhu , Jingwei Zhang , Zeqi Xiao , Runnan Chen , Tai Wang , Wenwei Zhang , Kai Chen

Unified multimodal models (UMMs) have emerged as a powerful paradigm in fundamental cross-modality research, demonstrating significant potential in both image understanding and generation. However, existing research in the face domain…

Computer Vision and Pattern Recognition · Computer Science 2026-01-14 Junzhe Li , Sifan Zhou , Liya Guo , Xuerui Qiu , Linrui Xu , Delin Qu , Tingting Long , Chun Fan , Ming Li , Hehe Fan , Jun Liu , Shuicheng Yan

The technological advancements in diffusion models (DMs) have demonstrated unprecedented capabilities in text-to-image generation and are widely used in diverse applications. However, they have also raised significant societal concerns,…

Computer Vision and Pattern Recognition · Computer Science 2024-10-31 Yihua Zhang , Chongyu Fan , Yimeng Zhang , Yuguang Yao , Jinghan Jia , Jiancheng Liu , Gaoyuan Zhang , Gaowen Liu , Ramana Rao Kompella , Xiaoming Liu , Sijia Liu

Discovering the 3D atomic structure of molecules such as proteins and viruses is a fundamental research problem in biology and medicine. Electron Cryomicroscopy (Cryo-EM) is a promising vision-based technique for structure estimation which…

Computer Vision and Pattern Recognition · Computer Science 2016-11-18 Marcus A. Brubaker , Ali Punjani , David J. Fleet

Minerals, metals, and plastics are indispensable for a functioning modern society. Yet, their supply is limited causing a need for optimizing ore extraction and recuperation from recyclable materials.Typically, those processes must be…

Computer Vision and Pattern Recognition · Computer Science 2023-12-15 Karol Gotkowski , Shuvam Gupta , Jose R. A. Godinho , Camila G. S. Tochtrop , Klaus H. Maier-Hein , Fabian Isensee

Cryo-EM data processing typically focuses on the structure of the main conformational state under investigation and discards images that belong to other states. This approach can reach atomic resolution, but ignores vast amounts of valuable…

Biomolecules · Quantitative Biology 2024-02-20 Felix Lambrecht , Andreas Kröpelin , Mario Lüttich , Michael Habeck , David Haselbach , Holger Stark

We propose EM-PASTE: an Expectation Maximization(EM) guided Cut-Paste compositional dataset augmentation approach for weakly-supervised instance segmentation using only image-level supervision. The proposed method consists of three main…

Computer Vision and Pattern Recognition · Computer Science 2022-12-16 Yunhao Ge , Jiashu Xu , Brian Nlong Zhao , Laurent Itti , Vibhav Vineet
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