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Effective disinfection is essential for maintaining water quality standards in distribution networks. Chlorination, as the most used technique, ensures safe water by maintaining sufficient chlorine residuals but also leads to the formation…

Systems and Control · Electrical Eng. & Systems 2024-09-16 Salma M. Elsherif , Ahmad F. Taha , Ahmed A. Abokifa

Disinfection byproducts are contaminants that can cause long-term effects on human health, occurring in chlorinated drinking water when the disinfectant interacts with natural organic matter. Their formation is affected by many…

Computers and Society · Computer Science 2025-11-18 Aristotelis Magklis , Andreas Kamilaris

In the event that a bacteriological or chemical toxin is intro- duced to a water distribution network, a large population of consumers may become exposed to the contaminant. A contamination event may be poorly predictable dynamic process…

Artificial Intelligence · Computer Science 2014-05-15 M. Ehsan Shafiee , Emily M. Zechman

In living cells, chemical reactions form a complex network. Complicated dynamics arising from such networks are the origins of biological functions. We propose a novel mathematical method to analyze bifurcation behaviors of a reaction…

Molecular Networks · Quantitative Biology 2018-08-08 Takashi Okada , Je-Chiang Tsai , Atsushi Mochizuki

Here we focus on the challenge of verifying the correctness of molecular implementations of abstract chemical reaction networks, where operation in a well-mixed "soup" of molecules is stochastic, asynchronous, concurrent, and often involves…

Computational Engineering, Finance, and Science · Computer Science 2019-10-01 Seung Woo Shin , Chris Thachuk , Erik Winfree

New checkable criteria for persistence of chemical reaction networks are proposed, which extend and complement those obtained by the authors in previous work. The new results allow the consideration of reaction rates which are time-varying,…

Molecular Networks · Quantitative Biology 2009-05-12 David Angeli , Patrick De Leenheer , Eduardo Sontag

Complex systems often have features that can be modeled by advanced mathematical tools [1]. Of special interests are the features of complex systems that have a network structure as such systems are important for modeling technological and…

Classical Physics · Physics 2019-06-13 Nikolay K. Vitanov , Kaloyan N. Vitanov , Zlatinka I. Dimitrova

Microorganisms are found in almost every environment, including the soil, water, air, and inside other organisms, like animals and plants. While some microorganisms cause diseases, most of them help in biological processes such as…

Machine Learning · Computer Science 2023-09-28 Daniel Agyapong , Jeffrey Ryan Propster , Jane Marks , Toby Dylan Hocking

Drainage in porous media can be broken down into two main mechanisms: a primary piston-like displacement of the interfaces through the bulk of pore bodies and throats, and a secondary slow flow through corners and films in the wake of the…

Drinking water for human health and well-being is crucial. Accidental and intentional water contamination can pose great danger to consumers. Optimal design of a system that can quickly detect the presence of contamination in a water…

Social and Information Networks · Computer Science 2016-01-12 Rezvan Nazempour , Mohammad Ali Saniee Monfared , Enrico Zio

The major biochemical networks of the living cell, the network of interacting genes and the network of biochemical reactions, are highly interdependent, however, they have been studied mostly as separate systems so far. In the last years an…

Molecular Networks · Quantitative Biology 2017-11-01 David F. Klosik , Anne Grimbs , Stefan Bornholdt , Marc-Thorsten Hütt

Liquid water, besides being fundamental for life on Earth, has long fascinated scientists due to several anomalies. Different hypotheses have been put forward to explain these peculiarities. The most accredited one foresees the presence in…

Numerical Analysis · Mathematics 2022-10-26 Michele Benzi , Isabella Daidone , Chiara Faccio , Laura Zanetti-Polzi

We investigate the chemical dissolution of porous media using a network model in which the system is represented as a series of interconnected pipes with the diameter of each segment increasing in proportion to the local reactant…

Fluid Dynamics · Physics 2015-06-12 Agnieszka Budek , Piotr Szymczak

Concentrations of pathogen genomes measured in wastewater have recently become available as a new data source to use when modeling the spread of infectious diseases. One promising use for this data source is inference of the effective…

Methodology · Statistics 2024-06-24 Isaac H. Goldstein , Daniel M. Parker , Sunny Jiang , Volodymyr M. Minin

This paper presents a stability test for a class of interconnected nonlinear systems motivated by biochemical reaction networks. One of the main results determines global asymptotic stability of the network from the diagonal stability of a…

Quantitative Methods · Quantitative Biology 2007-05-23 Murat Arcak , Eduardo D. Sontag

Network models are widely used as structural summaries of biochemical systems. Statistical estimation of networks is usually based on linear or discrete models. However, the dynamics of these systems are generally nonlinear, suggesting that…

Applications · Statistics 2014-06-03 C. J. Oates , F. Dondelinger , N. Bayani , J. Korola , J. W. Gray , S. Mukherjee

Anaerobic digestion enables the water industry to treat wastewater as a resource for generating energy and recovering valuable by-products. The complexity of the anaerobic digestion process has motivated the development of complex models.…

Populations and Evolution · Quantitative Biology 2015-03-06 M. J. Wade , R. W. Pattinson , N. G. Parker , J. Dolfing

In the context of epidemic spreading, many intricate dynamical patterns can emerge due to the cooperation of different types of pathogens or the interaction between the disease spread and other failure propagation mechanism. To unravel such…

Physics and Society · Physics 2024-05-07 Bo Li , David Saad

The application of newly developed first-principle modeling techniques to liquid water deepens our understanding of the microscopic origins of its unusual macroscopic properties and behaviour. Here, we review two novel ab initio…

Chemical Physics · Physics 2014-06-23 Rustam Z. Khaliullin , Thomas D. Kühne

In this paper, we propose a new method to identify biochemical reaction networks (i.e. both reactions and kinetic parameters) from heterogeneous datasets. Such datasets can contain (a) data from several replicates of an experiment performed…

Systems and Control · Computer Science 2015-09-21 Wei Pan , Ye Yuan , Lennart Ljung , Jorge Goncalves , Guy-Bart Stan
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