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The tree edit distance (TED) between two rooted ordered trees with $n$ nodes labeled from an alphabet $\Sigma$ is the minimum cost of transforming one tree into the other by a sequence of valid operations consisting of insertions, deletions…

Data Structures and Algorithms · Computer Science 2025-04-02 Jakob Nogler , Adam Polak , Barna Saha , Virginia Vassilevska Williams , Yinzhan Xu , Christopher Ye

Since the first theoretically feasible full homomorphic encryption (FHE) scheme was proposed in 2009, great progress has been achieved. These improvements have made FHE schemes come off the paper and become quite useful in solving some…

Cryptography and Security · Computer Science 2024-03-19 Yuqi Guo , Lin Li , Zhongxiang Zheng , Hanrui Yun , Ruoyan Zhang , Xiaolin Chang , Zhixuan Gao

Classically, the edit distance of two length-$n$ strings can be computed in $O(n^2)$ time, whereas an $O(n^{2-\epsilon})$-time procedure would falsify the Orthogonal Vectors Hypothesis. If the edit distance does not exceed $k$, the running…

Data Structures and Algorithms · Computer Science 2023-11-06 Daniel Gibney , Ce Jin , Tomasz Kociumaka , Sharma V. Thankachan

Fully Homomorphic Encryption (FHE) is known to be extremely computationally-intensive, application-specific accelerators emerged as a powerful solution to narrow the performance gap. Nonetheless, due to the increasing complexities in FHE…

Hardware Architecture · Computer Science 2024-12-16 Lin Ding , Song Bian , Penggao He , Yan Xu , Gang Qu , Jiliang Zhang

In this paper, we present a new approach dedicated to correcting the spelling errors of the Arabic language. This approach corrects typographical errors like inserting, deleting, and permutation. Our method is inspired from the Levenshtein…

Computation and Language · Computer Science 2012-08-23 Gueddah Hicham

The graph edit distance (GED) measures the dissimilarity between two graphs as the minimal cost of a sequence of elementary operations transforming one graph into another. This measure is fundamental in many areas such as structural pattern…

Data Structures and Algorithms · Computer Science 2019-11-27 Nicolas Boria , David B. Blumenthal , Sébastien Bougleux , Luc Brun

Functional bootstrapping is a core technique in Fully Homomorphic Encryption (FHE). For large plaintext, to evaluate a general function homomorphically over a ciphertext, in the FHEW/TFHE approach, since the function in look-up table form…

Cryptography and Security · Computer Science 2023-10-20 Dengfa Liu , Hongbo Li

Incorporating fully homomorphic encryption (FHE) into the inference process of a convolutional neural network (CNN) draws enormous attention as a viable approach for achieving private inference (PI). FHE allows delegating the entire…

Cryptography and Security · Computer Science 2023-10-26 Jaiyoung Park , Donghwan Kim , Jongmin Kim , Sangpyo Kim , Wonkyung Jung , Jung Hee Cheon , Jung Ho Ahn

Fully Homomorphic Encryption (FHE) is a technique that allows arbitrary computations to be performed on encrypted data without the need for decryption, making it ideal for securing many emerging applications. However, FHE computation is…

Computing distances and finding shortest paths in massive real-world networks is a fundamental algorithmic task in network analysis. There are two main approaches to solving this task. On one hand are traversal-based algorithms like…

Data Structures and Algorithms · Computer Science 2024-06-14 Sabyasachi Basu , Nadia Kōshima , Talya Eden , Omri Ben-Eliezer , C. Seshadhri

Homomorphic encryption (HE) allows secure computation on encrypted data without revealing the original data, providing significant benefits for privacy-sensitive applications. Many cloud computing applications (e.g., DNA read mapping,…

Cryptography and Security · Computer Science 2025-03-13 Mayank Kabra , Rakesh Nadig , Harshita Gupta , Rahul Bera , Manos Frouzakis , Vamanan Arulchelvan , Yu Liang , Haiyu Mao , Mohammad Sadrosadati , Onur Mutlu

The edit distance is a fundamental measure of sequence similarity, defined as the minimum number of character insertions, deletions, and substitutions needed to transform one string into the other. Given two strings of length at most $n$,…

Data Structures and Algorithms · Computer Science 2023-07-17 Tomasz Kociumaka , Anish Mukherjee , Barna Saha

Computing approximate nearest neighbors in high dimensional spaces is a central problem in large-scale data mining with a wide range of applications in machine learning and data science. A popular and effective technique in computing…

Machine Learning · Computer Science 2019-10-29 Lin Chen , Hossein Esfandiari , Thomas Fu , Vahab S. Mirrokni

Fully homomorphic encryption (FHE) is a powerful encryption technique that allows for computation to be performed on ciphertext without the need for decryption. FHE will thus enable privacy-preserving computation and a wide range of…

Cryptography and Security · Computer Science 2023-03-17 Qian Lou , Muhammad Santriaji , Ardhi Wiratama Baskara Yudha , Jiaqi Xue , Yan Solihin

We present a unified framework for accelerating edit-distance computation between two compressible strings using straight-line programs. For two strings of total length $N$ having straight-line program representations of total size $n$, we…

Computational Complexity · Computer Science 2009-02-17 Danny Hermelin , Gad M. Landau , Shir Landau , Oren Weimann

The edit distance is a metric of dissimilarity between strings, widely applied in computational biology, speech recognition, and machine learning. Let $e_k(n)$ denote the average edit distance between random, independent strings of $n$…

Formal Languages and Automata Theory · Computer Science 2024-04-09 Gianfranco Bilardi , Michele Schimd

The Levenshtein distance is an important tool for the comparison of symbolic sequences, with many appearances in genome research, linguistics and other areas. For efficient applications, an approximation by a distance of smaller…

Quantitative Methods · Quantitative Biology 2007-05-23 Michael Baake , Uwe Grimm , Robert Giegerich

Graph Edit Distance (GED) measures the (dis-)similarity between two given graphs, in terms of the minimum-cost edit sequence that transforms one graph to the other. However, the exact computation of GED is NP-Hard, which has recently…

Machine Learning · Computer Science 2024-11-05 Eeshaan Jain , Indradyumna Roy , Saswat Meher , Soumen Chakrabarti , Abir De

Fully homomorphic encryption (FHE) enables direct computation on encrypted data, making it a crucial technology for privacy protection. However, FHE suffers from significant performance bottlenecks. In this context, GPU acceleration offers…

Cryptography and Security · Computer Science 2024-10-10 Zhiwei Wang , Haoqi He , Lutan Zhao , Peinan Li , Zhihao Li , Dan Meng , Rui Hou

The edit distance problem is a classical fundamental problem in computer science in general, and in combinatorial pattern matching in particular. The standard dynamic programming solution for this problem computes the edit-distance between…

Data Structures and Algorithms · Computer Science 2016-10-05 Danny Hermelin , Gad M. Landau , Shir Landau , Oren Weimann
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