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Constructing reduced representations of high-dimensional systems is a fundamental problem in physical chemistry. Many unsupervised machine learning methods can automatically find such low-dimensional representations. However, an often…

Chemical Physics · Physics 2024-04-04 Jakub Rydzewski

This paper introduces an approach to endow generative diffusion processes the ability to satisfy and certify compliance with constraints and physical principles. The proposed method recast the traditional sampling process of generative…

Machine Learning · Computer Science 2024-11-05 Jacob K Christopher , Stephen Baek , Ferdinando Fioretto

This paper focuses on multi-block optimization problems over transport polytopes, which underlie various applications including strongly correlated quantum physics and machine learning. Conventional block coordinate descent-type methods for…

Optimization and Control · Mathematics 2024-08-27 Yukuan Hu , Mengyu Li , Xin Liu , Cheng Meng

Three-dimensional phase contrast imaging of multiply-scattering samples in X-ray and electron microscopy is extremely challenging, due to small numerical apertures, the unavailability of wavefront shaping optics, and the highly nonlinear…

Computational Physics · Physics 2021-06-02 Philipp M Pelz , Hamish G Brown , Jim Ciston , Scott D Findlay , Yaqian Zhang , Mary Scott , Colin Ophus

The Spreading Projection Algorithm for Rapid K-space samplING, or SPARKLING, is an optimization-driven method that has been recently introduced for accelerated 2D T2*-w MRI using compressed sensing. It has then been extended to address 3D…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-26 Chaithya G R , Pierre Weiss , Guillaume Daval-Frérot , Aurélien Massire , Alexandre Vignaud , Philippe Ciuciu

Entropy is a central concept in physics, but can be challenging to calculate even for systems that are easily simulated. This is exacerbated out of equilibrium, where generally little is known about the distribution characterizing simulated…

Statistical Mechanics · Physics 2024-05-09 Samuel D. Gelman , Guy Cohen

The maximum-entropy sampling problem is the NP-hard problem of maximizing the (log) determinant of an order-$s$ principle submatrix of a given order $n$ covariance matrix $C$. Exact algorithms are based on a branch-and-bound framework. The…

Optimization and Control · Mathematics 2021-06-08 Zhongzhu Chen , Marcia Fampa , Jon Lee

We present a novel method that integrates subspace modeling with an adaptive generative image prior for high-dimensional MR image reconstruction. The subspace model imposes an explicit low-dimensional representation of the high-dimensional…

Image and Video Processing · Electrical Eng. & Systems 2023-06-19 Ruiyang Zhao , Xi Peng , Varun A. Kelkar , Mark A. Anastasio , Fan Lam

Improvements in computational and experimental capabilities are rapidly increasing the amount of scientific data that is routinely generated. In applications that are constrained by memory and computational intensity, excessively large…

Machine Learning · Computer Science 2023-02-28 Malik Hassanaly , Bruce A. Perry , Michael E. Mueller , Shashank Yellapantula

We study the problem of overcoming exponential sample complexity in differential entropy estimation under Gaussian convolutions. Specifically, we consider the estimation of the differential entropy $h(X+Z)$ via $n$ independently and…

Information Theory · Computer Science 2023-05-12 Kristjan Greenewald , Brian Kingsbury , Yuancheng Yu

We propose a new randomized optimization method for high-dimensional problems which can be seen as a generalization of coordinate descent to random subspaces. We show that an adaptive sampling strategy for the random subspace significantly…

Optimization and Control · Mathematics 2019-12-19 Jonathan Lacotte , Mert Pilanci , Marco Pavone

Markov Chain Monte Carlo (MCMC) methods sample from unnormalized probability distributions and offer guarantees of exact sampling. However, in the continuous case, unfavorable geometry of the target distribution can greatly limit the…

Machine Learning · Statistics 2020-10-09 Zengyi Li , Yubei Chen , Friedrich T. Sommer

This paper presents reconstructions of homogeneous targets from the 2D and 3D Fresnel databases by one-step imaging methods based on the computation of topological derivative and topological energy fields. The electromagnetic inverse…

Analysis of PDEs · Mathematics 2025-01-28 A. Carpio , M. Pena , M. L. Rapún

Data augmentation improves the convergence of iterative algorithms, such as the EM algorithm and Gibbs sampler by introducing carefully designed latent variables. In this article, we first propose a data augmentation scheme for the…

Methodology · Statistics 2022-07-06 Linda S. L. Tan

Any given density matrix can be represented as an infinite number of ensembles of pure states. This leads to the natural question of how to uniquely select one out of the many, apparently equally suitable, possibilities. Following Jaynes'…

Quantum Physics · Physics 2025-04-23 Fabio Anza , James P. Crutchfield

This note is a geometric commentary on maximum-entropy proofs. Its purpose is to illustrate the geometric structures involved in such proofs, to explain more in detail why the maximization of the entropy can be turned into the minimization…

Popular Physics · Physics 2017-07-04 P. G. L. Porta Mana

Enhanced sampling algorithms have emerged as powerful methods to extend the utility of molecular dynamics simulations and allow the sampling of larger portions of the configuration space of complex systems in a given amount of simulation…

Statistical Mechanics · Physics 2022-12-19 Jérôme Hénin , Tony Lelièvre , Michael R. Shirts , Omar Valsson , Lucie Delemotte

We show that the principle of maximum entropy, a variational method appearing in statistical inference, statistical physics, and the analysis of stochastic dynamical systems, admits a geometric description from gauge theory. Using the…

Mathematical Physics · Physics 2023-01-05 Dalton A R Sakthivadivel

We present a technique for entropy optimization to calculate a distribution from its moments. The technique is based upon maximizing a discretized form of the Shannon entropy functional by mapping the problem onto a dual space where an…

Disordered Systems and Neural Networks · Physics 2009-11-10 K. Bandyopadhyay , A. K. Bhattacharya , Parthapratim Biswas , D. A. Drabold

The reconstruction of high-dimensional sparse signals is a challenging task in a wide range of applications. In order to deal with high-dimensional problems, efficient sparse fast Fourier transform algorithms are essential tools. The second…

Numerical Analysis · Mathematics 2017-11-15 Lutz Kämmerer , Daniel Potts , Toni Volkmer