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Objective. In this paper, we consider the problem of cross-subject decoding, where neural activity data collected from the prefrontal cortex of a given subject (destination) is used to decode motor intentions from the neural activity of a…

Neural and Evolutionary Computing · Computer Science 2022-02-23 Marko Angjelichinoski , Bijan Pesaran , Vahid Tarokh

Multi-modal brain tumor segmentation typically involves four magnetic resonance imaging (MRI) modalities, while incomplete modalities significantly degrade performance. Existing solutions employ explicit or implicit modality adaptation,…

Computer Vision and Pattern Recognition · Computer Science 2024-08-19 Kaixiang Yang , Wenqi Shan , Xudong Li , Xuan Wang , Xikai Yang , Xi Wang , Pheng-Ann Heng , Qiang Li , Zhiwei Wang

In the past five years, the use of generative and foundational AI systems has greatly improved the decoding of brain activity. Visual perception, in particular, can now be decoded from functional Magnetic Resonance Imaging (fMRI) with…

Image and Video Processing · Electrical Eng. & Systems 2024-03-15 Yohann Benchetrit , Hubert Banville , Jean-Rémi King

Neuron segmentation is the cornerstone of reconstructing comprehensive neuronal connectomes, which is essential for deciphering the functional organization of the brain. The irregular morphology and densely intertwined structures of neurons…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Liuyun Jiang , Yizhuo Lu , Yanchao Zhang , Jiazheng Liu , Hua Han

Decoding cognitive states from functional magnetic resonance imaging is central to understanding the functional organization of the brain. Within-subject decoding avoids between-subject correspondence problems but requires large sample…

Image and Video Processing · Electrical Eng. & Systems 2025-01-28 Himanshu Aggarwal , Liza Al-Shikhley , Bertrand Thirion

Naturalistic fMRI encoding must handle multimodal inputs, shifting fusion styles, and pronounced inter-subject variability. We introduce AFIRE (Agnostic Framework for Multimodal fMRI Response Encoding), an agnostic interface that…

Artificial Intelligence · Computer Science 2026-02-05 Xuanhua Yin , Runkai Zhao , Weidong Cai

The dispute of how the human brain represents conceptual knowledge has been argued in many scientific fields. Brain imaging studies have shown that the spatial patterns of neural activation in the brain are correlated with thinking about…

Neurons and Cognition · Quantitative Biology 2018-06-15 Subba Reddy Oota , Naresh Manwani , Bapi Raju S

Deep learning models exhibit state-of-the-art performance for many predictive healthcare tasks using electronic health records (EHR) data, but these models typically require training data volume that exceeds the capacity of most healthcare…

Machine Learning · Computer Science 2018-10-24 Edward Choi , Cao Xiao , Walter F. Stewart , Jimeng Sun

Composed image retrieval which combines a reference image and a text modifier to identify the desired target image is a challenging task, and requires the model to comprehend both vision and language modalities and their interactions.…

Computer Vision and Pattern Recognition · Computer Science 2023-10-03 Shu Zhao , Huijuan Xu

Neural decoding from electroencephalography (EEG) remains fundamentally limited by poor generalization to unseen subjects, driven by high inter-subject variability and the lack of large-scale datasets to model it effectively. Existing…

Machine Learning · Computer Science 2025-11-25 Mengchun Zhang , Kateryna Shapovalenko , Yucheng Shao , Eddie Guo , Parusha Pradhan

Cognitive neuroscience is enjoying rapid increase in extensive public brain-imaging datasets. It opens the door to large-scale statistical models. Finding a unified perspective for all available data calls for scalable and automated…

Machine Learning · Statistics 2019-05-16 Arthur Mensch , Julien Mairal , Danilo Bzdok , Bertrand Thirion , Gaël Varoquaux

Electroencephalography (EEG) decoding is a challenging task due to the limited availability of labelled data. While transfer learning is a promising technique to address this challenge, it assumes that transferable data domains and task are…

Signal Processing · Electrical Eng. & Systems 2023-08-07 Bruno Aristimunha , Raphael Y. de Camargo , Walter H. Lopez Pinaya , Sylvain Chevallier , Alexandre Gramfort , Cedric Rommel

The Mixture of Experts (MoE) has emerged as a highly successful technique in deep learning, based on the principle of divide-and-conquer to maximize model capacity without significant additional computational cost. Even in the era of…

Computation and Language · Computer Science 2024-09-02 Boan Liu , Liang Ding , Li Shen , Keqin Peng , Yu Cao , Dazhao Cheng , Dacheng Tao

Automatic segmentation of diverse heterogeneous brain lesions using multi-modal MRI is a challenging problem in clinical neuroimaging, mainly because of the lack of generalizability and high prediction variance of pathology-specific deep…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Md. Mehedi Hassan , Shafqat Alam , Shahriar Ahmed Seam , Maruf Ahmed

Functional MRI (fMRI) is a powerful technique that has allowed us to characterize visual cortex responses to stimuli, yet such experiments are by nature constructed based on a priori hypotheses, limited to the set of images presented to the…

Neurons and Cognition · Quantitative Biology 2021-05-18 Zijin Gu , Keith W. Jamison , Meenakshi Khosla , Emily J. Allen , Yihan Wu , Thomas Naselaris , Kendrick Kay , Mert R. Sabuncu , Amy Kuceyeski

Depth estimation from monocular endoscopic images presents significant challenges due to the complexity of endoscopic surgery, such as irregular shapes of human soft tissues, as well as variations in lighting conditions. Existing methods…

Image and Video Processing · Electrical Eng. & Systems 2025-02-07 Dawei Lu , Deqiang Xiao , Danni Ai , Jingfan Fan , Tianyu Fu , Yucong Lin , Hong Song , Xujiong Ye , Lei Zhang , Jian Yang

Visual encoding and decoding models act as gateways to understanding the neural mechanisms underlying human visual perception. Typically, visual encoding models that predict brain activity from stimuli and decoding models that reproduce…

Machine Learning · Computer Science 2026-04-14 Weijian Mai , Mu Nan , Yu Zhu , Jiahang Cao , Rui Zhang , Yuqin Dai , Chunfeng Song , Andrew F. Luo , Jiamin Wu

Deep learning models have gained increasing adoption in medical image analysis. However, these models often produce overconfident predictions, which can compromise clinical accuracy and reliability. Bridging the gap between high-performance…

Image and Video Processing · Electrical Eng. & Systems 2026-03-24 Jutika Borah , Hidam Kumarjit Singh

Standard decoding approaches rely on model-based channel estimation methods to compensate for varying channel effects, which degrade in performance whenever there is a model mismatch. Recently proposed Deep learning based neural decoders…

Signal Processing · Electrical Eng. & Systems 2019-03-07 Yihan Jiang , Hyeji Kim , Himanshu Asnani , Sreeram Kannan

Invasive brain-computer interfaces with Electrocorticography (ECoG) have shown promise for high-performance speech decoding in medical applications, but less damaging methods like intracranial stereo-electroencephalography (sEEG) remain…

Signal Processing · Electrical Eng. & Systems 2024-11-04 Hui Zheng , Hai-Teng Wang , Wei-Bang Jiang , Zhong-Tao Chen , Li He , Pei-Yang Lin , Peng-Hu Wei , Guo-Guang Zhao , Yun-Zhe Liu
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