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This paper develops a macroscopic, activity-based model of urban active mobility using nonintrusive sensor data. It introduces attendance functions to describe spatio-temporal travel patterns between activities and formulates the…

Methodology · Statistics 2026-05-14 Romain Azaïs , Adrien Marion , Florian Patout

The activity of biological cells is primarily based on chemical reactions and typically modeled as a reaction-diffusion system. Cells are, however, highly crowded with macromolecules, including a variety of molecular machines such as…

Biological Physics · Physics 2018-11-02 Yuichi Togashi

Evidence from experimental studies shows that oscillations due to electro-mechanical coupling can be generated spontaneously in smooth muscle cells. Such cellular dynamics are known as \textit{pacemaker dynamics}. In this article we address…

Dynamical Systems · Mathematics 2022-01-19 Hammed O. Fatoyinbo , Richard G. Brown , David J. W. Simpson , Bruce van Brunt

We study a hydrodynamic Cucker-Smale-type model with time delay in communication and information processing, in which agents interact with each other through normalized communication weights. The model consists of a pressureless Euler…

Analysis of PDEs · Mathematics 2017-07-18 Young-Pil Choi , Jan Haskovec

Numerical and analytical methods are developed for the investigation of contact sets in electrostatic-elastic deflections modeling micro-electro mechanical systems. The model for the membrane deflection is a fourth-order semi-linear partial…

Numerical Analysis · Mathematics 2020-04-20 Kelsey L. DiPietro , Ronald D. Haynes , Weizhang Huang , Alan E. Lindsay , Yufei Yu

Populations are heterogeneous, deviating in numerous ways. Phenotypic diversity refers to the range of traits or characteristics across a population, where for cells this could be the levels of signalling, movement and growth activity, etc.…

Cell Behavior · Quantitative Biology 2025-04-11 Tommaso Lorenzi , Kevin J Painter , Chiara Villa

Collective migration -- the directed, coordinated motion of many self-propelled agents -- is a fascinating emergent behavior exhibited by active matter that has key functional implications for biological systems. Extensive studies have…

Biological Physics · Physics 2022-06-07 Tapomoy Bhattacharjee , Daniel B. Amchin , Ricard Alert , J. A. Ott , Sujit S. Datta

We study the impact of contact heterogeneity on epidemic dynamics. A system characterized by multiple susceptible populations is considered. The description of the spread of an infectious disease is obtained through the study of a system of…

Physics and Society · Physics 2021-11-11 Andrea Medaglia , Mattia Zanella

Mathematical models are formal and simplified representations of the knowledge related to a phenomenon. In classical epidemic models, a neglected aspect is the heterogeneity of disease transmission and progression linked to the viral load…

Physics and Society · Physics 2022-05-10 Rossella Della Marca , Nadia Loy , Andrea Tosin

The shape of a cell influences and it is influenced by interactions with its neighbouring partners. Here, we introduce a coarse-grained model of non-reciprocal interactions between single-cell organisms to study emergent morphologies during…

Soft Condensed Matter · Physics 2025-06-17 Maitane Muñoz-Basagoiti , Michael Wassermair , Miguel Amaral , Buzz Baum , Anđela Šarić

In the present paper the macroscopic limits of the kinetic model for inter-acting entities (individuals, organisms, cells) are studied. The kinetic model is one-dimensional and entities are characterized by their position and orientation…

Analysis of PDEs · Mathematics 2012-07-12 Jacek Banasiak , Miroslaw Lachowicz

Various multicellular tissues show chiral morphology. Experimental studies have shown this can originate from cell chirality. However, no theory has been proposed to connect the cellular chiral torque and multicellular chiral morphogenesis.…

Soft Condensed Matter · Physics 2021-01-04 Takaki Yamamoto , Tetsuya Hiraiwa , Tatsuo Shibata

In this paper, we quantify the asymptotic limit of collective behavior kinetic equations arising in mathematical biology modeled by Vlasov-type equations with nonlocal interaction forces and alignment. More precisely, we investigate the…

Analysis of PDEs · Mathematics 2020-07-10 José A. Carrillo , Young-Pil Choi , Jinwook Jung

Many living and physical systems such as cell aggregates, tissues or bacterial colonies behave as unconventional systems of particles that are strongly constrained by volume exclusion and shape interactions. Understanding how these…

Quantitative Methods · Quantitative Biology 2026-05-20 Antoine Diez , Jean Feydy

In this paper, we present a computational framework based on fully Eulerian models for fluid-structure interaction for the numerical simulation of biological capsules. The flexibility of such models, given by the Eulerian treatment of the…

Fluid Dynamics · Physics 2024-03-20 Florian Desmons , Thomas Milcent , Anne-Virginie Salsac , Mirco Ciallella

There exists a wide variety of works on the dynamics of large populations ranging from simple heuristic modeling to those based on advanced computer supported methods. Their interconnections, however, remain mostly vague, which…

Dynamical Systems · Mathematics 2023-04-27 Yuri Kozitsky , Krzysztof Pilorz

The Cellular Potts Model (CPM) has been used for simulating various biological phenomena such as differential adhesion, fruiting body formation of the slime mold Dictyostelium discoideum, angiogenesis, cancer invasion, chondrogenesis in…

Biological Physics · Physics 2009-11-11 Mark Alber , Nan Chen , Tilmann Glimm , Pavel M. Lushnikov

We introduce a new heterogeneous multi-scale method for the simulation of flows of non-Newtonian fluids in general geometries and present its application to paradigmatic two-dimensional flows of polymeric fluids. Our method combines…

We present a review of recent theoretical results concerning the many-body localization (MBL) phenomenon, with the emphasis on dynamical density correlations and transport quantities. They are shown to be closely related, providing a…

Strongly Correlated Electrons · Physics 2017-04-13 P. Prelovšek , M. Mierzejewski , O. Barišić , J. Herbrych

In this paper, we study the numerical simulations for Euler system with maximal density constraint. This model is developed in [1, 3] with the constraint introduced into the system by a singular pressure law, which causes the transition of…

Numerical Analysis · Mathematics 2014-04-08 Pierre Degond , Jiale Hua , Laurent Navoret
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