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While self-supervised representation learning (SSL) has proved to be effective in the large model, there is still a huge gap between the SSL and supervised method in the lightweight model when following the same solution. We delve into this…

Computer Vision and Pattern Recognition · Computer Science 2021-12-09 Kai Zheng , Yuanjiang Wang , Ye Yuan

Molecular docking is a central method in the computer-based screening of compound libraries as a part of the rational approach to drug design. Although the method has proved its competence in predicting binding modes correctly, its inherent…

Biomolecules · Quantitative Biology 2014-04-01 Eva Kiszka

Accurately predicting the binding conformation of small-molecule ligands to protein targets is a critical step in rational drug design. Although recent deep learning-based docking surpasses traditional methods in speed and accuracy, many…

Computer Vision and Pattern Recognition · Computer Science 2025-08-14 Liyan Jia , Chuan-Xian Ren , Hong Yan

The prior self-supervised learning researches mainly select image-level instance discrimination as pretext task. It achieves a fantastic classification performance that is comparable to supervised learning methods. However, with degraded…

Computer Vision and Pattern Recognition · Computer Science 2022-05-11 Bing Zhao , Jun Li , Hong Zhu

Object pose distribution estimation is crucial in robotics for better path planning and handling of symmetric objects. Recent distribution estimation approaches employ contrastive learning-based approaches by maximizing the likelihood of a…

Computer Vision and Pattern Recognition · Computer Science 2024-09-12 Shishir Reddy Vutukur , Rasmus Laurvig Haugaard , Junwen Huang , Benjamin Busam , Tolga Birdal

The goal of contrastive learning based pre-training is to leverage large quantities of unlabeled data to produce a model that can be readily adapted downstream. Current approaches revolve around solving an image discrimination task: given…

Computer Vision and Pattern Recognition · Computer Science 2021-11-30 Chenhongyi Yang , Lichao Huang , Elliot J. Crowley

Contrastive Learning (CL) performances as a rising approach to address the challenge of sparse and noisy recommendation data. Although having achieved promising results, most existing CL methods only perform either hand-crafted data or…

Information Retrieval · Computer Science 2023-11-22 Xiuyuan Qin , Huanhuan Yuan , Pengpeng Zhao , Junhua Fang , Fuzhen Zhuang , Guanfeng Liu , Victor Sheng

Purpose: Surgery scene understanding with tool-tissue interaction recognition and automatic report generation can play an important role in intra-operative guidance, decision-making and postoperative analysis in robotic surgery. However,…

Artificial Intelligence · Computer Science 2022-11-29 Lalithkumar Seenivasan , Mobarakol Islam , Mengya Xu , Chwee Ming Lim , Hongliang Ren

Recent self-supervised contrastive methods have been able to produce impressive transferable visual representations by learning to be invariant to different data augmentations. However, these methods implicitly assume a particular set of…

Computer Vision and Pattern Recognition · Computer Science 2021-03-22 Tete Xiao , Xiaolong Wang , Alexei A. Efros , Trevor Darrell

Computational drug discovery provides an efficient tool helping large scale lead molecules screening. One of the major tasks of lead discovery is identifying molecules with promising binding affinities towards a target, a protein in…

Biological Physics · Physics 2019-09-18 Liangzhen Zheng , Jingrong Fan , Yuguang Mu

Drug target interaction (DTI) prediction is a cornerstone of computational drug discovery, enabling rational design, repurposing, and mechanistic insights. While deep learning has advanced DTI modeling, existing approaches primarily rely on…

Machine Learning · Computer Science 2025-11-05 Feng Jiang , Amina Mollaysa , Hehuan Ma , Tommaso Mansi , Junzhou Huang , Mangal Prakash , Rui Liao

Multi-label image classification presents a challenging task in many domains, including computer vision and medical imaging. Recent advancements have introduced graph-based and transformer-based methods to improve performance and capture…

Computer Vision and Pattern Recognition · Computer Science 2024-04-15 Ahmad Sajedi , Samir Khaki , Yuri A. Lawryshyn , Konstantinos N. Plataniotis

Deep neural networks (DNNs) have achieved remarkable success in computer vision tasks such as image classification, segmentation, and object detection. However, they are vulnerable to adversarial attacks, which can cause incorrect…

Computer Vision and Pattern Recognition · Computer Science 2025-11-03 Suklav Ghosh , Sonal Kumar , Arijit Sur

Understanding the structure of the protein-ligand complex is crucial to drug development. Existing virtual structure measurement and screening methods are dominated by docking and its derived methods combined with deep learning. However,…

Artificial Intelligence · Computer Science 2024-08-22 Kelei He , Tiejun Dong , Jinhui Wu , Junfeng Zhang

We present a contrasting learning approach with data augmentation techniques to learn document representations in an unsupervised manner. Inspired by recent contrastive self-supervised learning algorithms used for image and NLP pretraining,…

Computation and Language · Computer Science 2021-03-29 Dongsheng Luo , Wei Cheng , Jingchao Ni , Wenchao Yu , Xuchao Zhang , Bo Zong , Yanchi Liu , Zhengzhang Chen , Dongjin Song , Haifeng Chen , Xiang Zhang

Contrastive learning methods for unsupervised visual representation learning have reached remarkable levels of transfer performance. We argue that the power of contrastive learning has yet to be fully unleashed, as current methods are…

Computer Vision and Pattern Recognition · Computer Science 2021-03-10 Zhenda Xie , Yutong Lin , Zheng Zhang , Yue Cao , Stephen Lin , Han Hu

Recently, contrastive self-supervised learning has become a key component for learning visual representations across many computer vision tasks and benchmarks. However, contrastive learning in the context of domain adaptation remains…

Computer Vision and Pattern Recognition · Computer Science 2021-06-25 Mamatha Thota , Georgios Leontidis

In structure-based drug design, accurately estimating the binding affinity between a candidate ligand and its protein receptor is a central challenge. Recent advances in artificial intelligence, particularly deep learning, have demonstrated…

Biomolecules · Quantitative Biology 2025-09-18 Md Masud Rana , Farjana Tasnim Mukta , Duc D. Nguyen

Molecular representation learning is pivotal for various molecular property prediction tasks related to drug discovery. Robust and accurate benchmarks are essential for refining and validating current methods. Existing molecular property…

Chemical Physics · Physics 2024-06-27 Shikun Feng , Jiaxin Zheng , Yinjun Jia , Yanwen Huang , Fengfeng Zhou , Wei-Ying Ma , Yanyan Lan

Contrastive self-supervised learning has outperformed supervised pretraining on many downstream tasks like segmentation and object detection. However, current methods are still primarily applied to curated datasets like ImageNet. In this…

Computer Vision and Pattern Recognition · Computer Science 2021-12-15 Wouter Van Gansbeke , Simon Vandenhende , Stamatios Georgoulis , Luc Van Gool