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Hierarchical Bayesian inference can simultaneously account for both measurement uncertainty and selection effects within astronomical catalogs. In particular, the hierarchy imposed encodes beliefs about the interdependence of the physical…

General Relativity and Quantum Cosmology · Physics 2023-10-04 Reed Essick , Maya Fishbach

Causal Bayesian networks (CBN) are popular graphical probabilistic models that encode causal relations among variables. Learning their graphical structure from observational data has received a lot of attention in the literature. When there…

Machine Learning · Computer Science 2024-08-22 Christophe Gonzales , Amir-Hosein Valizadeh

The problem of learning structural equation models (SEMs) from data is a fundamental problem in causal inference. We develop a new algorithm --- which is computationally and statistically efficient and works in the high-dimensional regime…

Machine Learning · Computer Science 2019-01-30 Asish Ghoshal , Jean Honorio

Background: In epidemiology, causal inference and prediction modeling methodologies have been historically distinct. Directed Acyclic Graphs (DAGs) are used to model a priori causal assumptions and inform variable selection strategies for…

Methodology · Statistics 2020-07-03 Marco Piccininni , Stefan Konigorski , Jessica L Rohmann , Tobias Kurth

This work addresses the problem of learning directed acyclic graphs (DAGs) from nodal observations generated by a linear structural equation model. DAG learning is a central task in signal processing, machine learning, and causal inference,…

Machine Learning · Computer Science 2026-05-20 Samuel Rey , Madeline navarro , Gonzalo Mateos

The traditional two-stage approach to causal inference first identifies a single causal model (or equivalence class of models), which is then used to answer causal queries. However, this neglects any epistemic model uncertainty. In…

Machine Learning · Computer Science 2025-04-25 Christian Toth , Christian Knoll , Franz Pernkopf , Robert Peharz

We consider the problem of inferring the causal structure from observational data, especially when the structure is sparse. This type of problem is usually formulated as an inference of a directed acyclic graph (DAG) model. The linear…

Machine Learning · Statistics 2025-08-21 Kazuharu Harada , Hironori Fujisawa

Methods for automated discovery of causal relationships from non-interventional data have received much attention recently. A widely used and well understood model family is given by linear acyclic causal models (recursive structural…

Machine Learning · Statistics 2012-05-14 Patrik O. Hoyer , Antti Hyttinen

We propose a novel score-based approach to learning a directed acyclic graph (DAG) from observational data. We adapt a recently proposed continuous constrained optimization formulation to allow for nonlinear relationships between variables…

Machine Learning · Computer Science 2020-02-19 Sébastien Lachapelle , Philippe Brouillard , Tristan Deleu , Simon Lacoste-Julien

Causal DAGs(Directed Acyclic Graphs) are usually considered in a 2D plane. Edges indicate causal effects' directions and imply their corresponding time-passings. Due to the natural restriction of statistical models, effect estimation is…

Machine Learning · Computer Science 2023-09-26 Jia Li , Xiang Li , Xiaowei Jia , Michael Steinbach , Vipin Kumar

When designing new molecules with particular properties, it is not only important what to make but crucially how to make it. These instructions form a synthesis directed acyclic graph (DAG), describing how a large vocabulary of simple…

Machine Learning · Computer Science 2020-12-22 John Bradshaw , Brooks Paige , Matt J. Kusner , Marwin H. S. Segler , José Miguel Hernández-Lobato

We propose an empirical Bayes formulation of the structure learning problem, where the prior specification assumes that all node variables have the same error variance, an assumption known to ensure the identifiability of the underlying…

Computation · Statistics 2023-08-17 Hyunwoong Chang , James Cai , Quan Zhou

Learning the directed acyclic graph (DAG) structure of a Bayesian network from observational data is a notoriously difficult problem for which many hardness results are known. In this paper we propose a provably polynomial-time algorithm…

Machine Learning · Computer Science 2019-06-04 Asish Ghoshal , Jean Honorio

Bayesian networks (BN) are directed acyclic graphical (DAG) models that have been adopted into many fields for their strengths in transparency, interpretability, probabilistic reasoning, and causal modeling. Given a set of data, one hurdle…

Artificial Intelligence · Computer Science 2023-05-19 Christian D. Blakely

Inferring the causal relationships among a set of variables in the form of a directed acyclic graph (DAG) is an important but notoriously challenging problem. Recently, advancements in high-throughput genomic perturbation screens have…

Machine Learning · Computer Science 2025-10-03 Seong Woo Han , Daniel Duy Vo , Brielin C. Brown

We study submodels of Gaussian DAG models defined by partial homogeneity constraints imposed on the model error variances and structural coefficients. We represent these models with colored DAGs and investigate their properties for use in…

Statistics Theory · Mathematics 2025-12-12 Tobias Boege , Kaie Kubjas , Pratik Misra , Liam Solus

The main approach to defining equivalence among acyclic directed causal graphical models is based on the conditional independence relationships in the distributions that the causal models can generate, in terms of the Markov equivalence.…

Machine Learning · Computer Science 2020-07-03 AmirEmad Ghassami , Alan Yang , Negar Kiyavash , Kun Zhang

A common theme in causal inference is learning causal relationships between observed variables, also known as causal discovery. This is usually a daunting task, given the large number of candidate causal graphs and the combinatorial nature…

Machine Learning · Statistics 2022-10-11 Romain Lopez , Jan-Christian Hütter , Jonathan K. Pritchard , Aviv Regev

Existing score-based methods for directed acyclic graph (DAG) learning from observational data struggle to recover the causal graph accurately and sample-efficiently. To overcome this, in this study, we propose DrBO (DAG recovery via…

Machine Learning · Computer Science 2025-01-28 Bao Duong , Sunil Gupta , Thin Nguyen

Despite several advances in recent years, learning causal structures represented by directed acyclic graphs (DAGs) remains a challenging task in high dimensional settings when the graphs to be learned are not sparse. In this paper, we…

Machine Learning · Computer Science 2023-05-16 Zhuangyan Fang , Shengyu Zhu , Jiji Zhang , Yue Liu , Zhitang Chen , Yangbo He