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Neural network models in neuroscience allow one to study how the connections between neurons shape the activity of neural circuits in the brain. In this chapter, we study Combinatorial Threshold-Linear Networks (CTLNs) in order to…

Neurons and Cognition · Quantitative Biology 2018-04-05 Katherine Morrison , Carina Curto

We consider random graphs sampled uniformly from a structured class of graphs, such as the class of graphs embeddable in a given surface. We sharpen and extend earlier results on pendant appearances, concerning for example numbers of…

Combinatorics · Mathematics 2024-05-07 Colin McDiarmid

This chapter discusses the interplay between structure and dynamics in complex networks. Given a particular network with an endowed dynamics, our goal is to find partitions aligned with the dynamical process acting on top of the network. We…

Social and Information Networks · Computer Science 2020-05-08 Michael T. Schaub , Jean-Charles Delvenne , Renaud Lambiotte , Mauricio Barahona

Given a graph $G$, we have the adjacency matrix $A(G)$ and degree diagonal matrix $D(G)$. The $Q$-spectrum is the all eigenvalues of $Q$-matrix $Q(G)=A(G)+D(G)$. A class of graphs is determined by their generalized $Q$-spectrum (DGQS for…

Spectral Theory · Mathematics 2023-11-07 Liwen Gao , Xuejun Guo

A constructive characterization of the class of uniformly $4$-connected graphs is presented. The characterization is based on the application of graph operations to appropriate vertex and edge sets in uniformly $4$-connected graphs, that…

Combinatorics · Mathematics 2025-07-11 Xiang Chen , Shuai Kou , Chengfu Qin , Liqiong Xu , Weihua Yang

A construction sequence for a graph is a listing of the elements of the graph (the set of vertices and edges) such that each edge follows both its endpoints. The construction number of the graph is the number of such sequences. We determine…

Combinatorics · Mathematics 2024-12-03 Paul C. Kainen

A set of independence statements may define the independence structure of interest in a family of joint probability distributions. This structure is often captured by a graph that consists of nodes representing the random variables and of…

Methodology · Statistics 2011-07-15 Nanny Wermuth

We collect some general results on graph limits associated to hereditary classes of graphs. As examples, we consider some classes defined by forbidden subgraphs and some classes of intersection graphs, including triangle-free graphs,…

Combinatorics · Mathematics 2013-03-29 Svante Janson

We study path rings, Cohn path rings, and Leavitt path rings associated to directed graphs, with coefficients in an arbitrary ring $R$. For each of these types of rings, we stipulate conditions on the graph that are necessary and sufficient…

Rings and Algebras · Mathematics 2024-04-23 Karl Lorensen , Johan Öinert

We propose Graph Generating Dependencies (GGDs), a new class of dependencies for property graphs. Extending the expressivity of state of the art constraint languages, GGDs can express both tuple- and equality-generating dependencies on…

Databases · Computer Science 2020-06-16 Larissa C. Shimomura , George Fletcher , Nikolay Yakovets

We present sweeping line graphs, a generalization of $\Theta$-graphs. We show that these graphs are spanners of the complete graph, as well as of the visibility graph when line segment constraints or polygonal obstacles are considered. Our…

Computational Geometry · Computer Science 2024-01-09 Keenan Lee , André van Renssen

Because of the huge number of graphs possible even with a small number of nodes, inference on network structure is known to be a challenging problem. Generating large random directed graphs with prescribed probabilities of occurrences of…

Quantitative Methods · Quantitative Biology 2017-05-03 Frederic Y. Bois , Ghislaine Gayraud

A graphical model is a statistical model that is associated to a graph whose nodes correspond to variables of interest. The edges of the graph reflect allowed conditional dependencies among the variables. Graphical models admit…

Methodology · Statistics 2016-06-09 Mathias Drton , Marloes H. Maathuis

We consider the problem of graph generation guided by network statistics, i.e., the generation of graphs which have given values of various numerical measures that characterize networks, such as the clustering coefficient and the number of…

Social and Information Networks · Computer Science 2023-03-02 Jérôme Kunegis , Jun Sun , Eiko Yoneki

In this paper we give a new generalization of token graphs. Given two integers $1\leq m \leq k$ and a graph $G$ we define the generalized token graph of the graph $G$, to be the graph $F_k^m(G)$ whose vertices correspond to configurations…

Combinatorics · Mathematics 2025-09-03 C. Amairani Herrera-Ramirez , Teresa I. Hoekstra-Mendoza

Notions of minimal sufficient causation are incorporated within the directed acyclic graph causal framework. Doing so allows for the graphical representation of sufficient causes and minimal sufficient causes on causal directed acyclic…

Statistics Theory · Mathematics 2009-06-10 Tyler J. VanderWeele , James M. Robins

In this study we consider the problem of triangulated graphs. Precisely we give a necessary and sufficient condition for a graph to be triangulated. This give an alternative characterization of triangulated graphs. Our method is based on…

Combinatorics · Mathematics 2018-11-21 R. Gargouri , H. Najar

We propose a new approach for defining and searching clusters in graphs that represent real technological or transaction networks. In contrast to the standard way of finding dense parts of a graph, we concentrate on the structure of edges…

Combinatorics · Mathematics 2021-03-16 András London , Ryan R. Martin , András Pluhár

The design of neural architectures for structured objects is typically guided by experimental insights rather than a formal process. In this work, we appeal to kernels over combinatorial structures, such as sequences and graphs, to derive…

Neural and Evolutionary Computing · Computer Science 2017-10-31 Tao Lei , Wengong Jin , Regina Barzilay , Tommi Jaakkola

In a directed graph, the imbalance of a vertex is its outdegree minus its indegree. We characterize the sequences that are realizable as the sequence of imbalances of a simple directed graph. Moreover, a realization of a realizable sequence…

Combinatorics · Mathematics 2007-05-23 Dhruv Mubayi , Todd G. Will , Douglas B. West
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