Related papers: Adaptive Multimodal Protein Plug-and-Play with Dif…
Probabilistic regression models the entire predictive distribution of a response variable, offering richer insights than classical point estimates and directly allowing for uncertainty quantification. While diffusion-based generative models…
This paper introduces diffusion protein language model (DPLM), a versatile protein language model that demonstrates strong generative and predictive capabilities for protein sequences. We first pre-train scalable DPLMs from…
The plug-and-play priors (PnP) and regularization by denoising (RED) methods have become widely used for solving inverse problems by leveraging pre-trained deep denoisers as image priors. While the empirical imaging performance and the…
The ability to predict trajectories of surrounding agents and obstacles is a crucial component in many robotic applications. Data-driven approaches are commonly adopted for state prediction in scenarios where the underlying dynamics are…
Diffusion Transformer(DiT) based video generation models have recently achieved impressive visual quality and temporal coherence, but they still frequently violate basic physical laws and commonsense dynamics, revealing a lack of explicit…
Inverse protein folding generates valid amino acid sequences that can fold into a desired protein structure, with recent deep-learning advances showing strong potential and competitive performance. However, challenges remain, such as…
Large-scale diffusion models like Stable Diffusion are powerful and find various real-world applications while customizing such models by fine-tuning is both memory and time inefficient. Motivated by the recent progress in natural language…
Ultra-low-dose CT (ULDCT) imaging can greatly reduce patient radiation exposure, but the resulting scans suffer from severe structured and random noise that degrades image quality. To address this challenge, we propose a novel Plug-and-Play…
The Adaptive Momentum Estimation (Adam) algorithm is highly effective in training various deep learning tasks. Despite this, there's limited theoretical understanding for Adam, especially when focusing on its vanilla form in non-convex…
Existing physical model-based imaging methods for ultrasound elasticity reconstruction utilize fixed variational regularizers that may not be appropriate for the application of interest or may not capture complex spatial prior information…
Diffusion sampling-based Plug-and-Play (PnP) methods produce images with high perceptual quality but often suffer from reduced data fidelity, primarily due to the noise introduced during reverse diffusion. To address this trade-off, we…
Recent advancements in diffusion models (DMs) have been propelled by alignment methods that post-train models to better conform to human preferences. However, these approaches typically require computation-intensive training of a base model…
Recent developments have underscored the critical role of \textit{differential privacy} (DP) in safeguarding individual data for training machine learning models. However, integrating DP oftentimes incurs significant model performance…
Inverse protein folding is challenging due to its inherent one-to-many mapping characteristic, where numerous possible amino acid sequences can fold into a single, identical protein backbone. This task involves not only identifying viable…
Diffusion models are state-of-the-art generative models on data modalities such as images, audio, proteins and materials. These modalities share the property of exponentially decaying variance and magnitude in the Fourier domain. Under the…
Plug & Play methods combine proximal algorithms with denoiser priors to solve inverse problems. These methods rely on the computability of the proximal operator of the data fidelity term. In this paper, we propose a Plug & Play framework…
Deep convolutional networks have demonstrated the state-of-the-art performance on various medical image computing tasks. Leveraging images from different modalities for the same analysis task holds clinical benefits. However, the…
Snapshot compressive imaging (SCI) captures high-dimensional data efficiently by compressing it into two-dimensional observations and reconstructing high-dimensional data from two-dimensional observations with various algorithms. The…
Understanding how proteins structurally interact is crucial to modern biology, with applications in drug discovery and protein design. Recent machine learning methods have formulated protein-small molecule docking as a generative problem…
Diffusion Probabilistic Models (DPMs) have emerged as the de facto approach for high-fidelity image synthesis, operating diffusion processes on continuous VAE latent, which significantly differ from the text generation methods employed by…