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Automated detection of software vulnerabilities is critical for enhancing security, yet existing methods often struggle with the complexity and diversity of modern codebases. In this paper, we introduce EnStack, a novel ensemble stacking…

Software Engineering · Computer Science 2024-11-26 Shahriyar Zaman Ridoy , Md. Shazzad Hossain Shaon , Alfredo Cuzzocrea , Mst Shapna Akter

In Dec 2020, the results of AlphaFold2 were presented at CASP14, sparking a revolution in the field of protein structure predictions. For the first time, a purely computational method could challenge experimental accuracy for structure…

Biomolecules · Quantitative Biology 2022-12-16 Arne Elofsson

In recent years, defect prediction has received a great deal of attention in the empirical software engineering world. Predicting software defects before the maintenance phase is very important not only to decrease the maintenance costs but…

Software Engineering · Computer Science 2018-08-31 Ahmet Okutan

As text and code resources have expanded, large-scale pre-trained models have shown promising capabilities in code generation tasks, typically employing supervised fine-tuning with problem statement-program pairs. However, increasing model…

Computation and Language · Computer Science 2025-04-10 Nathanaël Beau , Benoît Crabbé

Tool learning has emerged as a crucial capability for large language models (LLMs) to solve complex real-world tasks through interaction with external tools. Existing approaches face significant challenges, including reliance on…

Computation and Language · Computer Science 2025-06-02 Hanxing Ding , Shuchang Tao , Liang Pang , Zihao Wei , Jinyang Gao , Bolin Ding , Huawei Shen , Xueqi Cheng

Determining the programming language of a source code file has been considered in the research community; it has been shown that Machine Learning (ML) and Natural Language Processing (NLP) algorithms can be effective in identifying the…

Software Engineering · Computer Science 2018-09-24 Kamel Alreshedy , Dhanush Dharmaretnam , Daniel M. German , Venkatesh Srinivasan , T. Aaron Gulliver

The software development process is characterized by an iterative cycle of continuous functionality implementation and debugging, essential for the enhancement of software quality and adaptability to changing requirements. This process…

Software Engineering · Computer Science 2024-11-27 Yihao Qin , Shangwen Wang , Yan Lei , Zhuo Zhang , Bo Lin , Xin Peng , Liqian Chen , Xiaoguang Mao

Code retrieval techniques and tools have been playing a key role in facilitating software developers to retrieve existing code fragments from available open-source repositories given a user query. Despite the existing efforts in improving…

Software Engineering · Computer Science 2019-10-01 Yao Wan , Jingdong Shu , Yulei Sui , Guandong Xu , Zhou Zhao , Jian Wu , Philip S. Yu

Despite Retrieval-Augmented Generation improving code completion, traditional retrieval methods struggle with information redundancy and a lack of diversity within limited context windows. To solve this, we propose a resource-optimized…

Software Engineering · Computer Science 2025-10-14 Xiaohan Chen , Zhongying Pan , Quan Feng , Yu Tian , Shuqun Yang , Mengru Wang , Lina Gong , Yuxia Geng , Piji Li , Xiang Chen

This study proposes a deep learning-based approach for discovering loops in programming code according to their potential for parallelization. Two genetic algorithm-based code generators were developed to produce two distinct types of code:…

Machine Learning · Computer Science 2025-10-03 Izavan dos S. Correia , Henrique C. T. Santos , Tiago A. E. Ferreira

This paper introduces a novel code-to-code search technique that enhances the performance of Large Language Models (LLMs) by including both static and dynamic features as well as utilizing both similar and dissimilar examples during…

Software Engineering · Computer Science 2024-04-17 Anthony Saieva , Saikat Chakraborty , Gail Kaiser

The rapid evolution of programming languages and software systems has necessitated the implementation of multilingual and scalable clone detection tools. However, it is difficult to achieve the above requirements at the same time. Most…

Software Engineering · Computer Science 2024-12-06 Yuhang Ye , Yuekun Wang , Yinxing Xue , Yueming Wu , Yang Liu

One major problem in maintaining a software system is to understand how many functional features in the system and how these features are implemented. In this paper a novel approach for locating features in code by semantic and dynamic…

Software Engineering · Computer Science 2015-12-15 Ren Wu

Background: Code cloning - copying and reusing pieces of source code - is a common phenomenon in software development in practice. There have been several empirical studies on the effects of cloning, but there are contradictory results…

Software Engineering · Computer Science 2016-11-28 Stefan Wagner , Asim Abdulkhaleq , Kamer Kaya , Alexander Paar

Recent studies highlight various machine learning (ML)-based techniques for code clone detection, which can be integrated into developer tools such as static code analysis. With the advancements brought by ML in code understanding, ML-based…

Software Engineering · Computer Science 2025-09-30 Teeradaj Racharak , Chaiyong Ragkhitwetsagul , Chayanee Junplong , Akara Supratak

Code cloning is frequently observed in software development, often leading to a variety of maintenance and security issues. While substantial research has been conducted on code cloning in traditional software, to the best of my knowledge,…

Software Engineering · Computer Science 2025-08-26 Huashan Chen , Zisheng Huang , Yifan Xu , Wenjie Huang , Jinfu Chen , Haotang Li , Kebin Peng , Feng Liu , Sen He

Molecular sequence analysis is crucial for comprehending several biological processes, including protein-protein interactions, functional annotation, and disease classification. The large number of sequences and the inherently complicated…

Genomics · Quantitative Biology 2025-10-10 Sarwan Ali , Prakash Chourasia , Bipin Koirala , Murray Patterson

Software developers embed logging statements inside the source code as an imperative duty in modern software development as log files are necessary for tracking down runtime system issues and troubleshooting system management tasks. Prior…

Software Engineering · Computer Science 2021-09-10 Sina Gholamian

Code cloning is an important software engineering aspect. It is a common software reuse principle that consists of duplicating source code within a program or across different systems owned or maintained by the same entity. There are…

Software Engineering · Computer Science 2015-04-30 Oualid El Halimi , Trith Patel , Zohaib S. Kiyani , Naresh. Kumar , Ankit Singh

This study introduces an efficacious approach, Masked Collaborative Contrast (MCC), to highlight semantic regions in weakly supervised semantic segmentation. MCC adroitly draws inspiration from masked image modeling and contrastive learning…

Computer Vision and Pattern Recognition · Computer Science 2023-11-10 Fangwen Wu , Jingxuan He , Yufei Yin , Yanbin Hao , Gang Huang , Lechao Cheng