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In this paper, we introduce a denoising diffusion algorithm to discover microstructures with nonlinear fine-tuned properties. Denoising diffusion probabilistic models are generative models that use diffusion-based dynamics to gradually…

Machine Learning · Computer Science 2023-06-14 Nikolaos N. Vlassis , WaiChing Sun

Recent advances in few-step diffusion models have demonstrated their efficiency and effectiveness by shortcutting the probabilistic paths of diffusion models, especially in training one-step diffusion models from scratch (\emph{a.k.a.}…

Machine Learning · Computer Science 2026-02-03 Haitao Lin , Peiyan Hu , Minsi Ren , Zhifeng Gao , Zhi-Ming Ma , Guolin ke , Tailin Wu , Stan Z. Li

Microstructure reconstruction, a major component of inverse computational materials engineering, is currently advancing at an unprecedented rate. While various training-based and training-free approaches are developed, the majority of…

Materials Science · Physics 2022-11-28 Christian Düreth , Paul Seibert , Dennis Rücker , Stephanie Handford , Markus Kästner , Maik Gude

Traditional diffusion models typically employ a U-Net architecture. Previous studies have unveiled the roles of attention blocks in the U-Net. However, they overlook the dynamic evolution of their importance during the inference process,…

Computer Vision and Pattern Recognition · Computer Science 2025-05-06 Xi Wang , Ziqi He , Yang Zhou

Denoising diffusion models have been a mainstream approach for image generation, however, training these models often suffers from slow convergence. In this paper, we discovered that the slow convergence is partly due to conflicting…

Computer Vision and Pattern Recognition · Computer Science 2024-03-12 Tiankai Hang , Shuyang Gu , Chen Li , Jianmin Bao , Dong Chen , Han Hu , Xin Geng , Baining Guo

Diffusion magnetic resonance imaging (dMRI) is a crucial non-invasive technique for exploring the microstructure of the living human brain. Traditional hand-crafted and model-based tissue microstructure reconstruction methods often require…

Image and Video Processing · Electrical Eng. & Systems 2025-02-26 Xinrui Ma , Jian Cheng , Wenxin Fan , Ruoyou Wu , Yongquan Ye , Shanshan Wang

With continuous progression of Moore's Law, integrated circuit (IC) device complexity is also increasing. Scanning Electron Microscope (SEM) image based extensive defect inspection and accurate metrology extraction are two main challenges…

Computer Vision and Pattern Recognition · Computer Science 2023-08-17 Vic De Ridder , Bappaditya Dey , Sandip Halder , Bartel Van Waeyenberge

Diffusion models have shown remarkable success across generative tasks, yet their high computational demands challenge deployment on resource-limited platforms. This paper investigates a critical question for compute-optimal diffusion model…

Computer Vision and Pattern Recognition · Computer Science 2025-08-11 Zhenbang Du , Yonggan Fu , Lifu Wang , Jiayi Qian , Xiao Luo , Yingyan , Lin

Accurate protein structural ensembles can be determined with metainference, a Bayesian inference method that integrates experimental information with prior knowledge of the system and deals with all sources of uncertainty and errors as well…

Quantitative Methods · Quantitative Biology 2019-01-24 Thomas Löhr , Carlo Camilloni , Massimiliano Bonomi , Michele Vendruscolo

Advancements in machine learning for molecular property prediction have improved accuracy but at the expense of higher computational cost and longer training times. Recently, the Joint Multi-domain Pre-training (JMP) foundation model has…

Machine Learning · Computer Science 2025-04-29 Yasir Ghunaim , Andrés Villa , Gergo Ignacz , Gyorgy Szekely , Motasem Alfarra , Bernard Ghanem

Mixture-of-Experts (MoE) models scale efficiently by activating only a subset of experts per token, offering a computationally sparse alternative to dense architectures. While prior post-training optimizations, such as inter- and…

Machine Learning · Computer Science 2025-09-04 Krishna Teja Chitty-Venkata , Sandeep Madireddy , Murali Emani , Venkatram Vishwanath

Deep learning has revolutionized medical image analysis, playing a vital role in modern clinical applications. However, the deployment of large-scale models in real-world clinical settings remains challenging due to high computational…

Machine Learning · Computer Science 2026-02-03 Cuong Manh Nguyen , Truong-Son Hy

The slow inference process of image diffusion models significantly degrades interactive user experiences. To address this, we introduce Diffusion Preview, a novel paradigm employing rapid, low-step sampling to generate preliminary outputs…

Machine Learning · Computer Science 2026-04-08 Fu-Yun Wang , Hao Zhou , Liangzhe Yuan , Sanghyun Woo , Boqing Gong , Bohyung Han , Ming-Hsuan Yang , Han Zhang , Yukun Zhu , Ting Liu , Long Zhao

Strategies to improve the predicting performance of Message-Passing Neural-Networks for molecular property predictions can be achieved by simplifying how the message is passed and by using descriptors that capture multiple aspects of…

Machine Learning · Computer Science 2025-10-22 Alma C. Castaneda-Leautaud , Rommie E. Amaro

Proteins are biomolecules of life. They fold into a great variety of three-dimensional (3D) shapes. Underlying these folding patterns are many recurrent structural fragments or building blocks (analogous to `LEGO bricks'). This paper…

Quantitative Methods · Quantitative Biology 2013-10-08 Arun S. Konagurthu , Arthur M. Lesk , David Abramson , Peter J. Stuckey , Lloyd Allison

Patient-reported outcome (PRO) measures are increasingly collected as a means of measuring healthcare quality and value. The capability to predict such measures enables patient-provider shared decision making and the delivery of…

Methodology · Statistics 2023-03-01 Jaeyoung Park , Muxuan Liang , Ying-Qi Zhao , Xiang Zhong

This paper proposes minimum distance inference for a structural parameter of interest, which is robust to the lack of identification of other structural nuisance parameters. Some choices of the weighting matrix lead to asymptotic…

Econometrics · Economics 2023-10-10 Joan Alegre , Juan Carlos Escanciano

Generating protein sequences that fold into a intended 3D structure is a fundamental step in de novo protein design. De facto methods utilize autoregressive generation, but this eschews higher order interactions that could be exploited to…

Biomolecules · Quantitative Biology 2023-12-06 John J. Yang , Jason Yim , Regina Barzilay , Tommi Jaakkola

This project addresses the challenge of human motion prediction, a critical area for applications such as au- tonomous vehicle movement detection. Previous works have emphasized the need for low inference times to provide real time…

Computer Vision and Pattern Recognition · Computer Science 2024-05-13 Edmund Shieh , Joshua Lee Franco , Kang Min Bae , Tej Lalvani

The past few years have witnessed the great success of Diffusion models~(DMs) in generating high-fidelity samples in generative modeling tasks. A major limitation of the DM is its notoriously slow sampling procedure which normally requires…

Machine Learning · Computer Science 2023-02-28 Qinsheng Zhang , Yongxin Chen
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