English
Related papers

Related papers: Multi-scale species richness estimation with deep …

200 papers

This paper proposes a multi-spectral random forest classifier with suitable feature selection and masking for tree cover estimation in urban areas. The key feature of the proposed classifier is filtering out the built-up region using…

Computer Vision and Pattern Recognition · Computer Science 2023-06-12 Usman Nazir , Momin Uppal , Muhammad Tahir , Zubair Khalid

Complex systems are fascinating because their rich macroscopic properties emerge from the interaction of many simple parts. Understanding the building principles of these emergent phenomena in nature requires assessing natural complex…

Neurons and Cognition · Quantitative Biology 2022-11-17 Anna Levina , Viola Priesemann , Johannes Zierenberg

Domain shifts are ubiquitous in machine learning, and can substantially degrade a model's performance when deployed to real-world data. To address this, distribution alignment methods aim to learn feature representations which are invariant…

Machine Learning · Computer Science 2024-10-08 Andrea Napoli , Paul White

Determining spatial distributions of species and communities are key objectives of ecology and conservation. Joint species distribution models use multi-species detection-nondetection data to estimate species and community distributions.…

Applications · Statistics 2022-12-15 Jeffrey W. Doser , Andrew O. Finley , Sudipto Banerjee

Several theoretical frameworks have been proposed to explain observed biodiversity patterns, ranging from the classical niche-based theories, mainly employing a continuous formalism, to neutral theories, based on statistical mechanics of…

Quantitative Methods · Quantitative Biology 2019-11-01 Xue Feng , Sara Bonetti , Amilcare Porporato

Studies on distribution, abundance and diversity of species revealed fascinating universalities in macroecology. Many of these patterns, like the species-area and range-abundance relationship or the year-to-year fluctuations in population…

Populations and Evolution · Quantitative Biology 2007-05-23 M. Ravasz , A. Balog , V. Marko , Z. Neda

The difficulty of monitoring biodiversity at fine scales and over large areas limits ecological knowledge and conservation efforts. To fill this gap, Species Distribution Models (SDMs) predict species across space from spatially explicit…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Lukas Picek , Christophe Botella , Maximilien Servajean , César Leblanc , Rémi Palard , Théo Larcher , Benjamin Deneu , Diego Marcos , Pierre Bonnet , Alexis Joly

There is no much doubt that biotic interactions shape community assembly and ultimately the spatial co-variations between species. There is a hope that the signal of these biotic interactions can be observed and retrieved by investigating…

Machine Learning · Statistics 2025-07-15 Sara Si-Moussi , Esther Galbrun , Mickael Hedde , Giovanni Poggiato , Matthias Rohr , Wilfried Thuiller

Multidimensional scaling (MDS) is a dimensionality reduction technique for microbial ecology data analysis that represents the multivariate structure while preserving pairwise distances between samples. While its improvement has enhanced…

The evolution of dispersal rate is studied with a model of several local populations linked by dispersal. Three dispersal strategies are considered where all, half, or none of the offspring disperse. The spatial scale (number of patches)…

Populations and Evolution · Quantitative Biology 2019-03-12 Emmanuel Paradis

Marine Protected Areas (MPAs) have been established globally to conserve marine resources. Given their maintenance costs and impact on commercial fishing, it is critical to evaluate their effectiveness to support future conservation. In…

Methodology · Statistics 2026-05-11 Dongjae Son , Brian J. Reich , Erin M. Schliep , Shu Yang , David A. Gill

The more than 200,000 glaciers outside the ice sheets play a crucial role in our society by influencing sea-level rise, water resource management, natural hazards, biodiversity, and tourism. However, only a fraction of these glaciers…

Computer Vision and Pattern Recognition · Computer Science 2025-02-03 Codruţ-Andrei Diaconu , Konrad Heidler , Jonathan L. Bamber , Harry Zekollari

1. Species distribution models and maps from large-scale biodiversity data are necessary for conservation management. One current issue is that biodiversity data are prone to taxonomic misclassifications. Methods to account for these…

Applications · Statistics 2023-05-04 Kwaku Peprah Adjei , Robert B. O'Hara , Wouter Koch , Anders Finstad

Wildlife monitoring is crucial for studying biodiversity loss and climate change. Camera trap images provide a non-intrusive method for analyzing animal populations and identifying ecological patterns over time. However, manual analysis is…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Julian D. Santamaria , Claudia Isaza , Jhony H. Giraldo

Quantifying diversity is of central importance for the study of structure, function and evolution of microbial communities. The estimation of microbial diversity has received renewed attention with the advent of large-scale metagenomic…

Populations and Evolution · Quantitative Biology 2013-08-06 Bart Haegeman , Jérôme Hamelin , John Moriarty , Peter Neal , Jonathan Dushoff , Joshua S. Weitz

Spatial fields in the Earth and environmental sciences are often available at multiple scales or resolutions. While coarse-scale data (e.g., from global circulation models) are often abundant, they lack the local detail provided by…

Methodology · Statistics 2026-04-01 Alejandro Calle-Saldarriaga , Paul F. V. Wiemann , Matthias Katzfuss

Fine-grained object recognition concerns the identification of the type of an object among a large number of closely related sub-categories. Multisource data analysis, that aims to leverage the complementary spectral, spatial, and…

Computer Vision and Pattern Recognition · Computer Science 2019-01-23 Gencer Sumbul , Ramazan Gokberk Cinbis , Selim Aksoy

Quantification of measurement uncertainty is crucial for robust scientific inference, yet accurate estimates of this uncertainty remain elusive for ecological measures of diversity. Here, we address this longstanding challenge by deriving a…

Populations and Evolution · Quantitative Biology 2024-02-27 Andreas Tiffeau-Mayer

In recent years, deep learning has been widely used in SAR ATR and achieved excellent performance on the MSTAR dataset. However, due to constrained imaging conditions, MSTAR has data biases such as background correlation, i.e., background…

Computer Vision and Pattern Recognition · Computer Science 2023-04-13 Weijie Li , Wei Yang , Li Liu , Wenpeng Zhang , Yongxiang Liu

Knowing where a particular species can or cannot be found on Earth is crucial for ecological research and conservation efforts. By mapping the spatial ranges of all species, we would obtain deeper insights into how global biodiversity is…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Christian Lange , Max Hamilton , Elijah Cole , Alexander Shepard , Samuel Heinrich , Angela Zhu , Subhransu Maji , Grant Van Horn , Oisin Mac Aodha