Related papers: NDAI-NeuroMAP: A Neuroscience-Specific Embedding M…
In recent years, the number of papers on Alzheimer's disease classification has increased dramatically, generating interesting methodological ideas on the use machine learning and feature extraction methods. However, practical impact is…
Learning efficient representations of local features is a key challenge in feature volume-based 3D neural mapping, especially in large-scale environments. In this paper, we introduce Decomposition-based Neural Mapping (DNMap), a…
We propose a unified optimization framework that combines neural networks with dictionary learning to model complex interactions between resting state functional MRI and behavioral data. The dictionary learning objective decomposes patient…
As artificial intelligence (AI) systems advance, we move towards broad AI: systems capable of performing well on diverse tasks, understanding context, and adapting rapidly to new scenarios. A central challenge for broad AI systems is to…
Clinical natural language processing (NLP) is increasingly in demand in both clinical research and operational practice. However, most of the state-of-the-art solutions are transformers-based and require high computational resources,…
Recent advances in AI have catalyzed the adoption of intelligent educational tools, yet many semantic retrieval systems remain ill-suited to the unique linguistic and structural characteristics of academic content. This study presents two…
Off-the-shelf biomedical embeddings obtained from the recently released various pre-trained language models (such as BERT, XLNET) have demonstrated state-of-the-art results (in terms of accuracy) for the various natural language…
Transforming neuroimaging data into clinically actionable biomarkers is a knowledge-intensive and labor-intensive process. Standardized workflows such as fMRIPrep have improved robustness and efficiency, but they are statically configured…
In the domain of Natural Language Processing (NLP), Named Entity Recognition (NER) stands out as a pivotal mechanism for extracting structured insights from unstructured text. This manuscript offers an exhaustive exploration into the…
Recent years have seen a surge in research focused on leveraging graph learning techniques to detect neurodegenerative diseases. However, existing graph-based approaches typically lack the ability to localize and extract the specific brain…
In this paper, I present our work on DeepRAG, a specialized embedding model we built specifically for Hindi language in RAG systems. While LLMs have gotten really good at generating text, their performance in retrieval tasks still depends…
Despite pre-training's progress in many important NLP tasks, it remains to explore effective pre-training strategies for dense retrieval. In this paper, we propose RetroMAE, a new retrieval oriented pre-training paradigm based on Masked…
Shared embedding spaces are widely used for multimodal search and data curation. In practice, two problems often limit how well this works. First, embeddings can reflect modality more than meaning, so examples cluster by input type even…
Explainability domain generalization and rare class reliability are critical challenges in medical AI where deep models often fail under real world distribution shifts and exhibit bias against infrequent clinical conditions This paper…
Information retrieval (IR) is essential in search engines and dialogue systems as well as natural language processing tasks such as open-domain question answering. IR serve an important function in the biomedical domain, where content and…
In this article we use the Natural Scenes Dataset (NSD) to train a family of feature-weighted receptive field neural encoding models. These models use a pre-trained vision or text backbone and map extracted features to the voxel space via…
Current state-of-the-art document retrieval solutions mainly follow an index-retrieve paradigm, where the index is hard to be directly optimized for the final retrieval target. In this paper, we aim to show that an end-to-end deep neural…
The development of large-scale artificial intelligence (AI) models is influencing neuroscience research by enabling end-to-end learning from raw brain signals and neural data. In this paper, we review applications of large-scale AI models…
As machine learning continues to gain momentum in the neuroscience community, we witness the emergence of novel applications such as diagnostics, characterization, and treatment outcome prediction for psychiatric and neurological disorders,…
In this dissertation we report results of our research on dense distributed representations of text data. We propose two novel neural models for learning such representations. The first model learns representations at the document level,…