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The (unweighted) tree edit distance problem for $n$ node trees asks to compute a measure of dissimilarity between two rooted trees with node labels. The current best algorithm from more than a decade ago runs in $O(n ^ 3)$ time [Demaine,…

Data Structures and Algorithms · Computer Science 2021-11-12 Xiao Mao

We study the problem of edit similarity joins, where given a set of strings and a threshold value $K$, we want to output all pairs of strings whose edit distances are at most $K$. Edit similarity join is a fundamental problem in data…

Databases · Computer Science 2017-10-10 Haoyu Zhang , Qin Zhang

In the pairwise weighted spanner problem, the input consists of an $n$-vertex-directed graph, where each edge is assigned a cost and a length. Given $k$ vertex pairs and a distance constraint for each pair, the goal is to find a…

Data Structures and Algorithms · Computer Science 2023-07-10 Elena Grigorescu , Nithish Kumar , Young-San Lin

Word Mover's Distance (WMD) computes the distance between words and models text similarity with the moving cost between words in two text sequences. Yet, it does not offer good performance in sentence similarity evaluation since it does not…

Computation and Language · Computer Science 2022-06-22 Chengwei Wei , Bin Wang , C. -C. Jay Kuo

In this paper, we present a novel heuristic algorithm for the stable but NP-complete deformation-based edit distance on merge trees. Our key contribution is the introduction of a user-controlled look-ahead parameter that allows to trade off…

Computational Geometry · Computer Science 2025-01-13 Florian Wetzels , Heike Leitte , Christoph Garth

In this work we define a novel edit distance for trees considered with some abstract weights on the edges. The metric is driven by the idea of considering trees as topological summaries in the context of persistence and topological data…

Combinatorics · Mathematics 2025-07-25 Matteo Pegoraro

In many applications, it is necessary to determine the similarity of two strings. A widely-used notion of string similarity is the edit distance: the minimum number of insertions, deletions, and substitutions required to transform one…

cmp-lg · Computer Science 2008-02-03 Eric Sven Ristad , Peter N. Yianilos

We consider the directed minimum weight cycle problem in the fully dynamic setting. To the best of our knowledge, so far no fully dynamic algorithms have been designed specifically for the minimum weight cycle problem in general digraphs.…

Data Structures and Algorithms · Computer Science 2021-06-23 Adam Karczmarz

The {\em edit distance} between two ordered trees with vertex labels is the minimum cost of transforming one tree into the other by a sequence of elementary operations consisting of deleting and relabeling existing nodes, as well as…

Data Structures and Algorithms · Computer Science 2010-12-01 Erik D. Demaine , Shay Mozes , Benjamin Rossman , Oren Weimann

We study approximation algorithms for the following three string measures that are widely used in practice: edit distance (ED), longest common subsequence (LCS), and longest increasing sequence (LIS). All three problems can be solved…

Data Structures and Algorithms · Computer Science 2020-07-28 Kuan Cheng , Zhengzhong Jin , Xin Li , Yu Zheng

We revisit the problem of computing the edit distance of a regular language given via an NFA. This problem relates to the inherent maximal error-detecting capability of the language in question. We present an efficient algorithm for solving…

Formal Languages and Automata Theory · Computer Science 2014-06-05 Lila Kari , Stavros Konstantinidis , Steffen Kopecki , Meng Yang

We consider the approximate pattern matching problem under the edit distance. Given a text $T$ of length $n$, a pattern $P$ of length $m$, and a threshold $k$, the task is to find the starting positions of all substrings of $T$ that can be…

Data Structures and Algorithms · Computer Science 2022-04-08 Panagiotis Charalampopoulos , Tomasz Kociumaka , Philip Wellnitz

Graph Edit Distance (GED) is a popular similarity measurement for pairwise graphs and it also refers to the recovery of the edit path from the source graph to the target graph. Traditional A* algorithm suffers scalability issues due to its…

Machine Learning · Computer Science 2020-12-03 Runzhong Wang , Tianqi Zhang , Tianshu Yu , Junchi Yan , Xiaokang Yang

Graph Edit Distance (GED) is defined as the minimum cost transformation of one graph into another and is a widely adopted metric for measuring the dissimilarity between graphs. The major problem of GED is that its computation is NP-hard,…

Machine Learning · Computer Science 2026-02-24 Francesco Leonardi , Markus Orsi , Jean-Louis Reymond , Kaspar Riesen

Classic similarity measures of strings are longest common subsequence and Levenshtein distance (i.e., the classic edit distance). A classic similarity measure of curves is dynamic time warping. These measures can be computed by simple…

Computational Complexity · Computer Science 2015-04-06 Karl Bringmann , Marvin Künnemann

A pattern $\alpha$ is a string of variables and terminal letters. We say that $\alpha$ matches a word $w$, consisting only of terminal letters, if $w$ can be obtained by replacing the variables of $\alpha$ by terminal words. The matching…

Data Structures and Algorithms · Computer Science 2022-07-18 Paweł Gawrychowski , Florin Manea , Stefan Siemer

Real-world data often comes in compressed form. Analyzing compressed data directly (without decompressing it) can save space and time by orders of magnitude. In this work, we focus on fundamental sequence comparison problems and try to…

Data Structures and Algorithms · Computer Science 2021-12-14 Arun Ganesh , Tomasz Kociumaka , Andrea Lincoln , Barna Saha

Assessing the extent of human edits on texts generated by Large Language Models (LLMs) is crucial to understanding the human-AI interactions and improving the quality of automated text generation systems. Existing edit distance metrics,…

Computation and Language · Computer Science 2024-12-24 Nicolas Devatine , Louis Abraham

Suppose that we have two parties that possess each a binary string. Suppose that the length of the first string (document) is $n$ and that the two strings (documents) have edit distance (minimal number of deletes, inserts and substitutions…

Data Structures and Algorithms · Computer Science 2015-12-04 Djamal Belazzougui

Edit distance between trees is a natural generalization of the classical edit distance between strings, in which the allowed elementary operations are contraction, uncontraction and relabeling of an edge. Demaine et al. [ACM Trans. on…

Data Structures and Algorithms · Computer Science 2018-04-27 Bartłomiej Dudek , Paweł Gawrychowski
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