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We introduce efficient algorithms for finding the $k$ shortest paths of a weighted pushdown automaton (WPDA), a compact representation of a weighted set of strings with potential applications in parsing and machine translation. Both of our…
Distributed word representation (a.k.a. word embedding) is a key focus in natural language processing (NLP). As a highly successful word embedding model, Word2Vec offers an efficient method for learning distributed word representations on…
The Dynamic Time Warping (DTW) distance is a popular similarity measure for polygonal curves (i.e., sequences of points). It finds many theoretical and practical applications, especially for temporal data, and is known to be a robust,…
In this paper, we consider the following query problem: given two weighted point sets $A$ and $B$ in the Euclidean space $\mathbb{R}^d$, we want to quickly determine that whether their earth mover's distance (EMD) is larger or smaller than…
String similarity, longest common subsequence and shortest edit scripts are the triplets of problem that related to each other. There are different algorithms exist to generate edit script by solving longest common subsequence problem. This…
This paper computationally obtains optimal bounded-weight, binary, error-correcting codes for a variety of distance bounds and dimensions. We compare the sizes of our codes to the sizes of optimal constant-weight, binary, error-correcting…
We resolve the randomized one-way communication complexity of Dynamic Time Warping (DTW) distance. We show that there is an efficient one-way communication protocol using $\widetilde{O}(n/\alpha)$ bits for the problem of computing an…
In this paper we deal with global approximation of solutions of stochastic differential equations (SDEs) driven by countably dimensional Wiener process. Under certain regularity conditions imposed on the coefficients, we show lower bounds…
An elastic-degenerate (ED) string is a sequence of $n$ sets of strings of total length $N$, which was recently proposed to model a set of similar sequences. The ED string matching (EDSM) problem is to find all occurrences of a pattern of…
In this paper we give an algorithm for streaming $k$-edit approximate pattern matching which uses space $\widetilde{O}(k^2)$ and time $\widetilde{O}(k^2)$ per arriving symbol. This improves substantially on the recent algorithm of…
We consider the Stochastic Matching problem, which is motivated by applications in kidney exchange and online dating. In this problem, we are given an undirected graph. Each edge is assigned a known, independent probability of existence and…
Graph edit distance (GED) is an important similarity measure adopted in a similarity-based analysis between two graphs, and computing GED is a primitive operator in graph database analysis. Partially due to the NP-hardness, the existing…
A weighted string over an alphabet of size $\sigma$ is a string in which a set of letters may occur at each position with respective occurrence probabilities. Weighted strings, also known as position weight matrices or uncertain sequences,…
We consider the notion of information distance between two objects $x$ and $y$ introduced by Bennett, G\'acs, Li, Vit\'anyi, and Zurek in 1998 as the minimal length of a program that computes $x$ from $y$ as well as computing $y$ from $x$.…
In this paper, we address a similarity search problem for spatial trajectories in road networks. In particular, we focus on the subtrajectory similarity search problem, which involves finding in a database the subtrajectories similar to a…
The need to identify graphs with small structural distances from a query arises in domains such as biology, chemistry, recommender systems, and social network analysis. Among several methods for measuring inter-graph distance, Graph Edit…
Given an LZW/LZ78 compressed text, we want to find an approximate occurrence of a given pattern of length m. The goal is to achieve time complexity depending on the size n of the compressed representation of the text instead of its length.…
Approximating the length of the longest increasing sequence (LIS) of an array is a well-studied problem. We study this problem in the data stream model, where the algorithm is allowed to make a single left-to-right pass through the array…
Many modern data-intensive computational problems either require, or benefit from distance or similarity data that adhere to a metric. The algorithms run faster or have better performance guarantees. Unfortunately, in real applications, the…
Assuming we are in a Word-RAM model with word size $w$, we show that we can construct in $o(w)$ time an error correcting code with a constant relative positive distance that maps numbers of $w$ bits into $\Theta(w)$-bit numbers, and such…