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Morphological trends in growing colonies of living cells are at the core of physiological and evolutionary processes. Using active gel equations, which include cell division, we show that shape changes during the growth can be regulated by…

Soft Condensed Matter · Physics 2016-07-27 Amin Doostmohammadi , Sumesh P. Thampi , Julia M. Yeomans

Cells and organisms follow aligned structures in their environment, a process that can generate persistent migration paths. Kinetic transport equations are a popular modelling tool for describing biological movements at the mesoscopic…

Cell Behavior · Quantitative Biology 2021-01-13 Nadia Loy , Thomas Hillen , Kevin John Painter

Morphogenesis depends crucially on the complex rheological properties of cell tissues and on their ability to maintain mechanical integrity while rearranging at long times. In this paper, we study the rheology of polygonal cellular networks…

Soft Condensed Matter · Physics 2021-03-31 Charlie Duclut , Joris Paijmans , Mandar M. Inamdar , Carl D. Modes , Frank Jülicher

Fungal protein materials exhibit inherently anisotropic microstructures formed by networks of hyphae, which suggest a natural pathway to replicate the fibrous texture of animal meat. We probe whether this structural anisotropy translates…

Computational Engineering, Finance, and Science · Computer Science 2026-04-20 Skyler R. St. Pierre , Thibault Vervenne , Ethan C. Darwin , Ellen Kuhl

We study the shape, elasticity and fluctuations of the recently predicted (cond-mat/9510172) and subsequently observed (in numerical simulations) (cond-mat/9705059) tubule phase of anisotropic membranes, as well as the phase transitions…

Soft Condensed Matter · Physics 2009-09-25 Leo Radzihovsky , John Toner

We apply a recently developed model of cytoskeletal force generation to study a cell intrinsic contractility, as well as its response to external loading. The model is based on a non-equilibrium thermodynamic treatment of the…

Subcellular Processes · Quantitative Biology 2015-06-19 Mirko Maraldi , Clara Valero , Krishna Garikipati

In neuroscience, synaptic plasticity refers to the set of mechanisms driving the dynamics of neuronal connections, called synapses and represented by a scalar value, the synaptic weight. A Spike-Timing Dependent Plasticity (STDP) rule is a…

Probability · Mathematics 2021-11-17 Philippe Robert , Gaetan Vignoud

We study the dynamical aspects of a statistical-mechanical model for fracture of heterogeneous media: the fiber bundle model with various interaction range. Although the model does not include any thermal activation process, the system…

Statistical Mechanics · Physics 2018-07-04 Subhadeep Roy , Takahiro Hatano

Efficient processing and transfer of information in neurons have been linked to noise-induced resonance phenomena such as coherence resonance (CR), and adaptive rules in neural networks have been mostly linked to two prevalent mechanisms:…

Neurons and Cognition · Quantitative Biology 2023-04-26 Marius E. Yamakou , Christian Kuehn

We study the creep rupture of bundles of viscoelastic fibers occurring under uniaxial constant tensile loading. A novel fiber bundle model is introduced which combines the viscoelastic constitutive behaviour and the strain controlled…

Statistical Mechanics · Physics 2019-05-15 Raul Cruz Hidalgo , Ferenc Kun , Hans. J. Herrmann

Formulating an appropriate elasto-viscoplastic constitutive equation is challenging, especially for a model describing pre-yielding solid and post-yielding liquid behaviours. Oldroyds 1946 formulation was one of the first models explaining…

Soft Condensed Matter · Physics 2023-06-19 Lalit Kumar

Complex tissue flows in epithelia are driven by intra- and inter-cellular processes that generate, maintain, and coordinate mechanical forces. There has been growing evidence that cell shape anisotropy, manifested as nematic order, plays an…

Soft Condensed Matter · Physics 2024-12-17 Jan Rozman , Chaithanya K. V. S. , Julia M. Yeomans , Rastko Sknepnek

Main characteristics of colloidal systems that develop fluid phases with different mechanical properties, namely shear-banding fluids, are briefly reviewed both from experimental and theoretical (modelling) point of view. A non-monotonic…

Soft Condensed Matter · Physics 2009-03-05 Daniel Quemada , Claudio Berli

The nonlinear response of molecular systems undergoing Markovian stochastic reorientations is calculated up to fifth order in the amplitude of the external field. Time-dependent perturbation theory is used to compute the relevant response…

Soft Condensed Matter · Physics 2018-10-10 Gregor Diezemann

Amorphous materials exhibit complex material proprteties with strongly nonlinear behaviors. Below a yield stress they behave as plastic solids, while they start to yield above a critical stress $\Sigma_c$. A key quantity controlling…

Biological Physics · Physics 2020-05-06 Marko Popović , Valentin Druelle , Natalie A. Dye , Frank Jülicher , Matthieu Wyart

Animal morphogenesis often involves significant shape changes of epithelial tissue sheets. Great progress has been made in understanding the underlying cellular driving forces and their coordination through biomechanical feedback loops.…

Soft Condensed Matter · Physics 2024-09-23 Nikolas H. Claussen , Fridtjof Brauns

Surfaces sputtered by ion beam bombardment have been known to exhibit patterns whose behavior is modeled with stochastic partial differential equations. A widely accepted model is the Cuerno-Barabasi model which is robust in its predictions…

Materials Science · Physics 2010-11-30 Emmanuel O. Yewande , Raphael O. Akande

There is now growing evidence of the emergence and biological functionality of liquid crystal features, including nematic order and topological defects, in cellular tissues. However, how such features that intrinsically rely on particle…

Soft Condensed Matter · Physics 2019-02-06 Romain Mueller , Julia Yeomans , Amin Doostmohammadi

Real-world solids, such as rocks, soft tissues, and engineering materials, are often under some form of stress. Most real materials are also, to some degree, anisotropic due to their microstructure, a characteristic often called the…

Classical Physics · Physics 2022-08-09 Soumya Mukherjee , Michel Destrade , Artur L. Gower

We study the dynamic response of driven systems in the presence of quenched disorder. A simple heuristic model for hysteretic creep of elastic manifolds is proposed and evaluated numerically. It provides a qualitative explanation of the…

Condensed Matter · Physics 2009-10-28 Stefan Scheidl , Valerii Vinokur