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Revealing hidden geometry and topology in noisy data sets is a challenging task. Elastic principal graph is a computationally efficient and flexible data approximator based on embedding a graph into the data space and minimizing the energy…

Data Structures and Algorithms · Computer Science 2019-09-25 A. N. Gorban , E. M. Mirkes , A. Zinovyev

Many succinct data structures on the word RAM require precomputed tables to start operating. Usually, the tables can be constructed in sublinear time. In this time, most of a data structure is not initialized, i.e., there is plenty of…

Data Structures and Algorithms · Computer Science 2018-04-30 Frank Kammer , Andrej Sajenko

Neural networks are often represented as graphs of connections between neurons. However, despite their wide use, there is currently little understanding of the relationship between the graph structure of the neural network and its…

Machine Learning · Computer Science 2020-08-28 Jiaxuan You , Jure Leskovec , Kaiming He , Saining Xie

The generation of voluminous scientific data poses significant challenges for efficient storage, transfer, and analysis. Recently, error-bounded lossy compression methods emerged due to their ability to achieve high compression ratios while…

Machine Learning · Computer Science 2025-05-13 Guozhong Li , Muhannad Alhumaidi , Spiros Skiadopoulos , Ibrahim Hoteit , Panos Kalnis

Compression and sparsification algorithms are frequently applied in a preprocessing step before analyzing or optimizing large networks/graphs. In this paper we propose and study a new framework contracting edges of a graph (merging vertices…

Data Structures and Algorithms · Computer Science 2019-02-14 Aaron Bernstein , Karl Däubel , Yann Disser , Max Klimm , Torsten Mütze , Frieder Smolny

In this paper, we present a probability graph-based semantic information compression system for scenarios where the base station (BS) and the user share common background knowledge. We employ probability graphs to represent the shared…

Information Theory · Computer Science 2025-04-09 Zhouxiang Zhao , Zhaohui Yang , Quoc-Viet Pham , Qianqian Yang , Zhaoyang Zhang

Suffix trees are a fundamental data structure in stringology, but their space usage, though linear, is an important problem for its applications. We design and implement a new compressed suffix tree targeted to highly repetitive texts, such…

Data Structures and Algorithms · Computer Science 2019-02-12 Manuel Cáceres , Gonzalo Navarro

Due to the dynamic nature of real-world graphs, there has been a growing interest in the graph-streaming setting where a continuous stream of graph updates is mixed with arbitrary graph queries. In principle, purely-functional trees are an…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-18 Laxman Dhulipala , Julian Shun , Guy Blelloch

The graph layouts used for complex network studies have been mainly been developed to improve visualization. If we interpret the layouts in metric spaces such as Euclidean ones, however, the embedded spatial information can be a valuable…

Physics and Society · Physics 2012-12-19 Sang Hoon Lee , Petter Holme

The need for scalable concurrent ordered set data structures with linearizable range query support is increasing due to the rise of multicore computers, data processing platforms and in-memory databases. This paper presents a new concurrent…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-05 Kjell Winblad

Tries are popular data structures for storing a set of strings, where common prefixes are represented by common root-to-node paths. Over fifty years of usage have produced many variants and implementations to overcome some of their…

Data Structures and Algorithms · Computer Science 2011-12-06 Roberto Grossi , Giuseppe Ottaviano

Graph is a useful data structure to model various real life aspects like email communications, co-authorship among researchers, interactions among chemical compounds, and so on. Supporting such real life interactions produce a knowledge…

Data Structures and Algorithms · Computer Science 2016-11-11 Kifayat Ullah Khan , Waqas Nawaz , Young-Koo Lee

Graph learning from data represents a canonical problem that has received substantial attention in the literature. However, insufficient work has been done in incorporating prior structural knowledge onto the learning of underlying…

Machine Learning · Statistics 2019-04-23 Sandeep Kumar , Jiaxi Ying , José Vinícius de M. Cardoso , Daniel Palomar

Graphs provide a natural way to represent data by encoding information about objects and the relationships between them. With the ever-increasing amount of data collected and generated, locating specific patterns of relationships between…

Data Structures and Algorithms · Computer Science 2026-04-28 Tatyana Benko , Rebecca Jones , Lucas Tate

We explore the use of graph neural networks (GNNs) to model spatial processes in which there is no a priori graphical structure. Similar to finite element analysis, we assign nodes of a GNN to spatial locations and use a computational…

Machine Learning · Computer Science 2019-11-19 Ferran Alet , Adarsh K. Jeewajee , Maria Bauza , Alberto Rodriguez , Tomas Lozano-Perez , Leslie Pack Kaelbling

We consider the problem of optimizing the interconnection graphs of complex networks to promote synchronization. When traditional optimization methods are inapplicable, due to uncertain or unknown node dynamics, we propose a data-driven…

Systems and Control · Electrical Eng. & Systems 2023-09-29 Marco Coraggio , Mario di Bernardo

We introduce a binary embedding framework, called Proximity Preserving Code (PPC), which learns similarity and dissimilarity between data points to create a compact and affinity-preserving binary code. This code can be used to apply fast…

Machine Learning · Computer Science 2020-02-06 Inbal Lav , Shai Avidan , Yoram Singer , Yacov Hel-Or

Representing patterns as labeled graphs is becoming increasingly common in the broad field of computational intelligence. Accordingly, a wide repertoire of pattern recognition tools, such as classifiers and knowledge discovery procedures,…

Computer Vision and Pattern Recognition · Computer Science 2017-05-11 Lorenzo Livi

We introduce a new dynamic data structure for maintaining the strongly connected components (SCCs) of a directed graph (digraph) under edge deletions, so as to answer a rich repertoire of connectivity queries. Our main technical…

Data Structures and Algorithms · Computer Science 2018-03-02 Loukas Georgiadis , Thomas Dueholm Hansen , Giuseppe F. Italiano , Sebastian Krinninger , Nikos Parotsidis

Bit arrays, or bitmaps, are used to significantly speed up set operations in several areas, such as data warehousing, information retrieval, and data mining, to cite a few. However, bitmaps usually use a large storage space, thus requiring…

Data Structures and Algorithms · Computer Science 2015-03-14 Alessandro Colantonio , Roberto Di Pietro